| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4167 |
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| Symbol | |
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| ID | 5612348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5125011 |
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| End bp | 5125883 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935126 |
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| Product | DNA-binding transcriptional regulator IlvY |
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| Protein accession | YP_001475899 |
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| Protein GI | 157377299 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATATAA AAACCATCAA GCTTTACCTG CACCTTACTG AGAGCCTCCA CTTTTCCCGT
ACCGCTCAGG CCATGCACGT CAGTCCGTCG ACCCTGAGCA GGGCAATGCA AAGATTAGAA
GATGAGGTAG GCGCTAAACT GCTTCAACGG GATAACCGAA GTGTCGCGCT AACCAGTGCA
GGCGTTGAAT ATCGCCACTT TGCCGAACAG ACTCTGGATC ATTGGACCAA GCTAAAAACC
AAGATAGATC CCAAGCAAGA CCTGCTCAGG GGCAAGCTCA ACCTCTACTG TTCGGTGACC
GCCGCCTATA GTCACCTACC GGGGTTACTC GATAGATTCA GACGCGAGCA CCCATTGGTC
GAAATCGCAC TGACCACAGG TGATGCGGCC AATGCCGTCA GTGAGGTGAG AAATAACCGC
GCCGATATCG CCATTGCCGC ACTGCCGGAT CCCTTTCCCG ACAATCTGCA TTTCGCAAAA
ATTGATGATA TTCCACTGGT CATCATCGCC CCCACATTTC GCTGTCGGGT GCAGGAGTTA
CTGACAGAAT CCTATATCCC ATGGGATCGC CTCCCCTTTA TCGTCCCCGA ACACGGACCG
GGAAGACGTC GAACCGACAA TTGGTTTAAA CAGCTTGGCT TATCACCCAA TATTTATGCT
CAGGTATCGG GGCAGGAGGC CATCGCCTCT ATGGTGGCAC TAGGCTGCGG AGTCAGTATC
ACTCCGGAAG TGGTTATCAC CAACAGTCCG GTTCGCGATA GAATTCAGAT AATCCCGACT
CCCATCGCGA TCCCGCCTTT CGAGTTAGGC TGCTGTTGCA GAAACAAGCG ATTAGACGAC
CCCATAGTGG CCGCATTTCT TAAGGTGGTT TAA
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| Protein sequence | MDIKTIKLYL HLTESLHFSR TAQAMHVSPS TLSRAMQRLE DEVGAKLLQR DNRSVALTSA
GVEYRHFAEQ TLDHWTKLKT KIDPKQDLLR GKLNLYCSVT AAYSHLPGLL DRFRREHPLV
EIALTTGDAA NAVSEVRNNR ADIAIAALPD PFPDNLHFAK IDDIPLVIIA PTFRCRVQEL
LTESYIPWDR LPFIVPEHGP GRRRTDNWFK QLGLSPNIYA QVSGQEAIAS MVALGCGVSI
TPEVVITNSP VRDRIQIIPT PIAIPPFELG CCCRNKRLDD PIVAAFLKVV
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