| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4166 |
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| Symbol | |
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| ID | 5612347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5123306 |
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| End bp | 5124787 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935125 |
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| Product | ketol-acid reductoisomerase |
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| Protein accession | YP_001475898 |
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| Protein GI | 157377298 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0059] Ketol-acid reductoisomerase |
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| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACT ATTTTAACTC TCTGAATTTG CGTCAACAAC TAGAACAACT GGCTCAATGC
CGCTTCATGG ATCGCAACGA ATTTAGTGAG GGTTGTGACT TCATCAAGGG CTGGAATATC
GTCATCTTAG GTTGTGGCGC CCAAGGCCTT AACCAAGGTT TGAACATGCG TGACTCCGGT
TTGAATATCG CTTATGCACT CAGGGCTCAG GCTATCGAAG AGAAGCGTGC TTCCTATCAA
AAGGCTACCG GAAATGGCTT CCGTGTGGGG ACGATTGAAG AGCTCATTCC CGATGCCGAT
CTCGTACTTA ACCTGACCCC GGATAAGCAG CATACCGATG CCGTAAACAC CGTTATGCCG
CTAATGAAGC AGGGCGCAAC CTTGTCCTAT TCTCATGGCT TCAATATCGT TGAAGAGGGA
ATGCAGGTCC GTGATGACAT CACAGTCATT ATGGTTGCCC CTAAGTGCCC TGGCACCGAA
GTACGTGAAG AGTATAAGCG TGGATTCGGC GTGCCGACTC TGGTTGCGGT TCACCCAGAG
AATGACCCTA AGGGGAACGG TTTCGATATC GCTAAAGCCT ATGCGAGTGC GACAGGTGGC
GACAGAGCGG GTGTGCTTCA CTCGTCGTTT ATCGCCGAAG TTAAGTCTGA TCTTATGGGT
GAGCAAACTA TTCTATGTGG CATGCTGCAA ACCGGTGCAA TTCTTGGTTA CGAGAAGATG
GTTGCCGATG GGGTTGAGCC TGGATATGCC GCTAAACTAA TTCAACAAGG TTGGGAAACC
ACGACCGAAG CGCTGAAGCA TGGTGGTATA ACCAACATGA TGGATCGCCT GTCTAACCCA
GCCAAGATTA AAGCGTTCGA GATGGCCGAA GAGCTTAAGG GTATTCTTGC TCCTCTGTTC
GAGAAGCATA TGGACGACAT CATAGGTGGC GAGTTCTCAA AGACTATGAT GGAAGATTGG
GCAAATGATG ATGCGAACCT ACTTAAGTGG CGTAAAGAGA CGGGTGAAAC TGCCTTCGAA
AATGCGCCTC AAAGTGATGA AGATATCGAT GAGCAGGCCT ATTTCGATAA GGGTATCTTC
CTTGTCGCCA TGATCAAAGC GGGTGTTGAG CTGGCGTTCG ACACTATGGT TGCCTCGGGT
ATTGTCGAAG AGTCGGCTTA TTATGAGTCG CTACATGAGA CACCACTCAT TGCGAACACG
ATTGCCCGTA AGCGCCTTTA CGAGATGAAC ATCGTTATCT CGGATACGGC TGAATATGGC
TGTTACCTGT TTAACCATGC GGCTGTACCT ATGTTGCGTG ATTACGTCAA TGCCATGTCT
CCTGAGTTCC TGGGTGCCGG CCTGGGTGAC AGTGGCAATG GCGTCGATAA CCAGCGTCTA
ATCGAAGTGA ATGCAGCGAT TCGCGGCACA GGTGTTGAGA AAATTGGCGC CGAACTGCGT
GGCTACATGA CAGAGATGCA GCGTATCGTC GAAGAGAAGT AA
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| Protein sequence | MANYFNSLNL RQQLEQLAQC RFMDRNEFSE GCDFIKGWNI VILGCGAQGL NQGLNMRDSG
LNIAYALRAQ AIEEKRASYQ KATGNGFRVG TIEELIPDAD LVLNLTPDKQ HTDAVNTVMP
LMKQGATLSY SHGFNIVEEG MQVRDDITVI MVAPKCPGTE VREEYKRGFG VPTLVAVHPE
NDPKGNGFDI AKAYASATGG DRAGVLHSSF IAEVKSDLMG EQTILCGMLQ TGAILGYEKM
VADGVEPGYA AKLIQQGWET TTEALKHGGI TNMMDRLSNP AKIKAFEMAE ELKGILAPLF
EKHMDDIIGG EFSKTMMEDW ANDDANLLKW RKETGETAFE NAPQSDEDID EQAYFDKGIF
LVAMIKAGVE LAFDTMVASG IVEESAYYES LHETPLIANT IARKRLYEMN IVISDTAEYG
CYLFNHAAVP MLRDYVNAMS PEFLGAGLGD SGNGVDNQRL IEVNAAIRGT GVEKIGAELR
GYMTEMQRIV EEK
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