| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4152 |
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| Symbol | |
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| ID | 5612428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5104445 |
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| End bp | 5105284 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935111 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475884 |
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| Protein GI | 157377284 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3059] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAAGA TTAAATCAAT ACGTGCTTTA GCCATTGCGC GAGTGCTATT GGGAGTATTT
TTACTGACAA CAGCAATGAA TCGCTTTACT GCAGTCGATG CGAGCTATTT TACTAAACAA
CTGGTGGCTG TGGGCTTGCC TGAGCTGGCC TGGTTATCAG CTGTGCTAGG TGTCATGCAG
TTAACTGTGG TTGCCGCATT AATCTTTCCT GCGCATAAGC TGAGCCAGTA TATGCTCTAT
CTCTATTCAC TATTGGCTTT GGTACCTATC TTGATGCTAT TCACTCACCC GGTGTGGATA
GAGAGCTTAG GCGGCTTTCC TGCCATAGGT GCGGGGCAGG GACTGATTAA GTATCTGACC
ATCGCAGGTG TGAGTGCATA TATCGCCTCA GACTACGGCG TAGATCGGCA GCTGAACCGA
CTTTCACTTA AGTTGATATG GGCGGGGGTG ATATTAGTGA TGCTATGGAT AGGAGGAATG
AAATTCACTC AGGTAGAAGC CGATGGTATT GAGCGTTTGA TGGCGACGAG CCCATTTTTC
AGCTGGATAT ATGAGTTGTT TAGTGTGCTT CATGGTTCAT ATTTTATCGG TGTGATTGAG
TTGGTTGCGG TATTCGGACT TATTATCGGC TGTAAATACG TGTGGGCGAG GGCATTGGGA
TTATCGGTTG CCGCATTAAC CTTCCTGGCG ACACAAAGCT TTATTATTAG CTTACCCGCT
TATGAGTTGA GTCATGGTTT GCCACTATTA ACGGGAAGTG GTCAGTTTAT CGTGAAAGAT
CTTGTCTTGC TGGCGGGATG CCTTTTATTT TATGCATCGA AAAAGAAAAC GGTCGAATAG
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| Protein sequence | MCKIKSIRAL AIARVLLGVF LLTTAMNRFT AVDASYFTKQ LVAVGLPELA WLSAVLGVMQ
LTVVAALIFP AHKLSQYMLY LYSLLALVPI LMLFTHPVWI ESLGGFPAIG AGQGLIKYLT
IAGVSAYIAS DYGVDRQLNR LSLKLIWAGV ILVMLWIGGM KFTQVEADGI ERLMATSPFF
SWIYELFSVL HGSYFIGVIE LVAVFGLIIG CKYVWARALG LSVAALTFLA TQSFIISLPA
YELSHGLPLL TGSGQFIVKD LVLLAGCLLF YASKKKTVE
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