| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4128 |
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| Symbol | |
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| ID | 5610843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5045721 |
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| End bp | 5046359 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935083 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475860 |
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| Protein GI | 157377260 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.561037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATG CATCTAAAGT GAAAAAAGAA GTCCCCTTCG ACGAAATACT AATACGTGAA
TATCTGTTGG ATAATCCCGA TTTTTTCAGT CGATATCCAG AATTGCTATT AGCCATGCGA
ATTCCCCACG CCGAGCGCGG AGCCGTATCT CTGGTTGAAC GAAAGCAGGA GATGCTGAGA
AGTCGGGTGC AGCAGCTTGA GGAGGAGATC ACCTCCTTGA TGGGAATGGC GACCCGTAAT
GAAATGATCT ATATGTTCAA TACGGCACTG TCGCTTAAAT TACTGGAATG TGAAGATCTC
GGAGAATTAA GGCAAGCCTT ATCCGAGGGG CTAAAGTCTC AGTTCCATTT TAGTCACGTC
AGACTTATTA CTGTACATGA TCTCGATAGT GAACTGTCGC GGATCTGGAG CAAACGCTTG
AGCCAGGGGC ATTACTTCGG GCGCCTGACC ATCGAAGAGT CTAAACGTCT GTTCGGTAGC
GACGTGGGAT CTGTGGCATT ATCCAGATTG TCTGAGCAGT GTGGGCAGGT GATTTTTGCT
ATCGCGAGTC AGGATGCGAT GCACTTTCAT CCCGAGATGG ATAATCTACT GTTGGATCAG
CTTAAGCAGC TTTTAGATCA CTTATTGCCA AAATTATAA
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| Protein sequence | MSDASKVKKE VPFDEILIRE YLLDNPDFFS RYPELLLAMR IPHAERGAVS LVERKQEMLR
SRVQQLEEEI TSLMGMATRN EMIYMFNTAL SLKLLECEDL GELRQALSEG LKSQFHFSHV
RLITVHDLDS ELSRIWSKRL SQGHYFGRLT IEESKRLFGS DVGSVALSRL SEQCGQVIFA
IASQDAMHFH PEMDNLLLDQ LKQLLDHLLP KL
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