| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4115 |
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| Symbol | |
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| ID | 5610240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5033691 |
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| End bp | 5034359 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935070 |
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| Product | fumarate reductase respiratory complex, transmembrane subunit |
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| Protein accession | YP_001475847 |
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| Protein GI | 157377247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000068623 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATAA CAAAAACAAT AAAAAACTGT AGTGGCTGGC TCGATATGAG CCAGAGTGTG
TCAGGCGTTA TTTTGGCCGT GTTCTTGTGG ACACATTTAA TACTGGTGTC ATCAATACTG
CTCGGCGCCG ACGCAATGAC CTGGGTCGCG GGCATGATGG AGCTGAACTT TTTGAGTGCC
GATGGCCATG GTTACCCTTG GGTGGTGTCA ATCATTGCCA TCGCTATCGC AAGTTTAGTG
CTGGTTCATG TGTTAATTGC GGTTCAAAAG CTGCCTCTGA GCTTGAGACA ACAGATTGCA
CTAAGAAAGC AGATGGCCTC AATCAGTCAT GGAGATACCA AACTCTGGGT CTGGCAGGCC
GTTACGGGGG TCGGTATCTT GCTGATGTTA CCCGTACACC TGTGGCTTAT CGGCTCGGCA
CCAGAGACTA TCGGTCCTTC AGGATCCGCA GACAGGATCT GGAATGATGG TGTATGGATG
TTGTATATGC CGCTTCTGCT CTGCGTAGAG TTACATGCCG CCATCGGAGT ATATCGAGTC
GCCATAAAAT GGGGCGCCGC CCGAGATCTC AATACCCGAG CTCGAATGAA AAAGATAAAA
ACGATAGTGA GTGTGGTATT TGTGGTTATC GGCATGGCGT CATTGCTGGC GTTTCTTCCA
CACGCATAG
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| Protein sequence | MAITKTIKNC SGWLDMSQSV SGVILAVFLW THLILVSSIL LGADAMTWVA GMMELNFLSA
DGHGYPWVVS IIAIAIASLV LVHVLIAVQK LPLSLRQQIA LRKQMASISH GDTKLWVWQA
VTGVGILLML PVHLWLIGSA PETIGPSGSA DRIWNDGVWM LYMPLLLCVE LHAAIGVYRV
AIKWGAARDL NTRARMKKIK TIVSVVFVVI GMASLLAFLP HA
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