| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4106 |
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| Symbol | |
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| ID | 5613136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5021328 |
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| End bp | 5021867 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935061 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475838 |
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| Protein GI | 157377238 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.475572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0367818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACACCA ACGTCAAGGC ATTACTTGCC ACAACAGCCC TATTTTTTAG CTGTCAAACA
TTAGCTGAAA GTGGTTGTGC ATTCGAAGAC AAGCAAGATG GCTTTATTGC CACATGCAGC
GAGGAGAAAC AAGAAGTGAT ATTAACAGGA GCCGTTGAAG CCCAAACCTT AGTTACCGAA
CTCAGTGACT TCAGCGAAGG TTATAAAGAG TATAAAGTCG ATACAGCAGC GATTTCCCCA
TTGAAAAATC TGAAAGAGCC TACGGAAATT GTCGTTATTA TCGGCACCTG GTGTCCCGAT
TGCCACCGTG AAACGCCACG CTTTATCCGC ATAATGGAAG AGCTCAACAA CCCTAATATC
AAGGTCACCT ATATCGGTGT CGATCGTGAG AAAGCCGACC CTAAAGGATT AGCCGCTCAA
TATGAGTTTA CTCGTATCCC AACCTTTATC GTGATGCAGA AGGGCGAAGA GGTCGGTCGG
ATTATTGAGA AACCAGAACA GTCTTTAGAG AAAGACTTAG CGGCAATGTT TAAGTCTTAG
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| Protein sequence | MNTNVKALLA TTALFFSCQT LAESGCAFED KQDGFIATCS EEKQEVILTG AVEAQTLVTE
LSDFSEGYKE YKVDTAAISP LKNLKEPTEI VVIIGTWCPD CHRETPRFIR IMEELNNPNI
KVTYIGVDRE KADPKGLAAQ YEFTRIPTFI VMQKGEEVGR IIEKPEQSLE KDLAAMFKS
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