| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4061 |
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| Symbol | |
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| ID | 5610293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4972744 |
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| End bp | 4973925 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640935016 |
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| Product | xanthine/uracil/vitamin C permease |
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| Protein accession | YP_001475793 |
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| Protein GI | 157377193 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATGTA AAACCACATT TCTTAAAAAA TGTGATCAAT TTTCCGGTGA GTTCAGTGGC
GCTTTCGCCG ATCTGGGGAC TTTCCTCCCG CTGGTACTGG GCCTGATTGC GCTCAACCAT
TTCTCGCCTC AGGGCATCTT TATGGGCTTT GGAGTCTTTG CCCTGTTTAC CGCTTTTTAC
TACCGGCGGC CCATTCCCGT ACAACCTATG AAGGTGATCG CCGCCTTGGT AATCGCTCAG
GGGCTGACTC CGGGCATGCT ACAGGCCAGT GGCATGATGA TGGGCGTCAT ACTCCTGATC
CTGGCATTTA GCGGTGCCAT AAACTGGATG GCCAAACAGC TCTCTCCGGC GGTGAGCATA
GGTATTCAGC TCGCTATCGG CATTCAGTTG ATGTGGATGG GTGCGCAGAT GATGAGCCAG
ACCTGGCTTC TGGGTCTTGG GGCATTTACC CTACTGTTCT GCAGTCGCTT CCTGCCGCTG
CGCTATCTTG CCATGCCACT GGTCATTATC ATTGGTATGT TATGGCAATA TCACTCGGGC
TCGCTCTTAA CACCCGAGTC GGCCCTACTC TCCACCCAGG CCTCGATGCA GAGCACGATG
CATAGTCAAC AATGGAGCTT AAGCTGGCCA ACACTATCTG AGTGGTCATC GGCCGCAGTA
TTGCTGGTCT TGCCTCAACT GGCACTCACC CTGACCAATG CCGTTATCGC GACATCGGCC
ATGGCGAAGG AGAAGTTTCC CGGCGACCGC GAGAAGTTCA CCCCCAAACG GCTGGCCACC
AGCTCGGGGC TGGCAAACCT GCTGCTGACC CCCTTCGGCG CGACAGCCAT GTGCCACGGA
GCTGGAGGCC TTGCGGTGCA ACATCACTTC GGCGCTCGGG GCATATGGGC ACCGGTCATA
TTCGGTAGCT CCTGTCTGCT TATCGCCTTC AGTTGGGGAG AGAATGTCGC CTGGTTATTG
GGCTTGATCC CACTGGCTAT CTTAGGCAGC CTGCTCTCCA TCGCCGGCCT GCAACTGGCC
TGGTCGAAGC GTCTGCTCGA CGGCAAGCCT TTCTGTATCT TGGTTATCCT CTCCACCGCC
GCAATCTGCT TGCTGCTCAA TACGGCAGCA GGGTTAGCAG TAGGTGTAAT TCTAGAGATG
GGACGCCGAC ACTGGCGGAT CTTCTCCGAT TTGAAATCTT AA
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| Protein sequence | MTCKTTFLKK CDQFSGEFSG AFADLGTFLP LVLGLIALNH FSPQGIFMGF GVFALFTAFY
YRRPIPVQPM KVIAALVIAQ GLTPGMLQAS GMMMGVILLI LAFSGAINWM AKQLSPAVSI
GIQLAIGIQL MWMGAQMMSQ TWLLGLGAFT LLFCSRFLPL RYLAMPLVII IGMLWQYHSG
SLLTPESALL STQASMQSTM HSQQWSLSWP TLSEWSSAAV LLVLPQLALT LTNAVIATSA
MAKEKFPGDR EKFTPKRLAT SSGLANLLLT PFGATAMCHG AGGLAVQHHF GARGIWAPVI
FGSSCLLIAF SWGENVAWLL GLIPLAILGS LLSIAGLQLA WSKRLLDGKP FCILVILSTA
AICLLLNTAA GLAVGVILEM GRRHWRIFSD LKS
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