| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4060 |
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| Symbol | |
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| ID | 5610292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4971045 |
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| End bp | 4972448 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935015 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_001475792 |
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| Protein GI | 157377192 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA CTCTGATCCC CTTTGCCCTC GCGCTCGCTG GCCTCTCTTT ACTCAGCAGC
CCAGCGAATG CCGCCAATCA ACATAAAGAT TATATTGAAG GCCCCTTCAC CGAAGGGACT
CAAGTGACCC AGCAATGTAT CGAATGTCAT GAAGATCATG CCAAAGACTT TATGAAGTCA
TCGCATTGGA CCTGGGAACT GGAACAAGAA CTTCCGGGTC GTACGGTGAA ACGTGGTAAG
AAAAACAGTA TCAATAACTT CTGTGTTGCC ATTTCCGGTA ACGAACCCAG ATGTACCGGT
TGCCATGCCG GTTATGGCTG GAAAGACAAT AACTTCGACT TTACCGACAT GACCAAGGTC
GATTGTCTGG TTTGTCACGA CACCACTGGC ACCTATGTTA AAGATCCCCT TCGTGCCGGG
GAAGTATTCG CTAGCGTCAA TCTTGAAAAA GTCGCTCAGA ACGTCGGCGC CCCCGTGCGT
GATAACTGCG GTAGCTGCCA CTTCTACGGC GGCGGCGGCG ATGGTGTCAA GCATGGCGAT
CTGGACTCAT CTATGTCCTA CCCTGACAAG GCCACCGATG TGCATATGGA CACAGACGGC
AACGATTTCC AGTGTCAGGC CTGTCACACG ACCGAACAGC ACCAGATCAC GGGTAATGCC
ATGGGGGTAT CACCCGGTGG TATCGACCAT ATCGGCTGTG AAAACTGCCA CGATAGTGCG
CCCCACAAGA ACAAGCGCCT TAACACTCAC ACGGCAACGG TCGCCTGTCA GACCTGTCAT
ATCCCGTTCT TCGCCAAAAA TGAGCCAACC AAGGTAAGTT GGGATTGGTC AACTGCAGGC
CAGGACAAGA AAGGCACTGT AGATGCAAAC GGTAAGCATA CCTACAAGAA GAAGAAGGGC
AGCTTCGTCT GGGAGAAAAT GATAACACCG TCTTATGCCT GGTTTAATGG CAAGGCCGAT
GCCTATATGC CCGGTGACAA GATGGATCCG ACCAAGGTAA CCAAGCTGGC CTACCCACTG
GGTGATATCA AAGATCCCAA AGCGAAGATC TATCCCTTCA AGGTTCACAC CGGCAAGCAG
ATCTACGACA AGAAGCTGAA CATCTTTATC TCACCAAAGA CATTCGGTGA AGGTGGTTAC
TGGAGTGAGT TTGACTGGGA TCTCGCCGCT AAATTAGGTA TGGAAGCCAA TGCAACTATG
GTTGATAAAG GACTCAAGTA CAGTGGCGAA CATGGCTTTG CCGCAACTGA GATGTGGTGG
CGTATTAACC ACATGGTCTC TCCTAAAGAG GAGTCGCTCA AGTGTAACGA TTGCCATAAG
AAAGGCACTC GCATGAACTG GCAAGCACTG GGCTATGAAG GCGACCCGAT GAAGAACAAG
AAAGGAGAGA AACACGCAAA ATAG
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| Protein sequence | MKHTLIPFAL ALAGLSLLSS PANAANQHKD YIEGPFTEGT QVTQQCIECH EDHAKDFMKS
SHWTWELEQE LPGRTVKRGK KNSINNFCVA ISGNEPRCTG CHAGYGWKDN NFDFTDMTKV
DCLVCHDTTG TYVKDPLRAG EVFASVNLEK VAQNVGAPVR DNCGSCHFYG GGGDGVKHGD
LDSSMSYPDK ATDVHMDTDG NDFQCQACHT TEQHQITGNA MGVSPGGIDH IGCENCHDSA
PHKNKRLNTH TATVACQTCH IPFFAKNEPT KVSWDWSTAG QDKKGTVDAN GKHTYKKKKG
SFVWEKMITP SYAWFNGKAD AYMPGDKMDP TKVTKLAYPL GDIKDPKAKI YPFKVHTGKQ
IYDKKLNIFI SPKTFGEGGY WSEFDWDLAA KLGMEANATM VDKGLKYSGE HGFAATEMWW
RINHMVSPKE ESLKCNDCHK KGTRMNWQAL GYEGDPMKNK KGEKHAK
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