| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4050 |
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| Symbol | |
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| ID | 5610098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4961154 |
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| End bp | 4961939 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935005 |
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| Product | ubiquinone/menaquinone biosynthesis methylase-like protein |
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| Protein accession | YP_001475782 |
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| Protein GI | 157377182 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGCT GCACGGACCT CTATCAGCAC CCATTGACCC ATCACCTGCT TGGCGATAGC
TTTCACCCCG GCGGCCTTGA GACCACACGC TCACTCGCGG CTCAGTGTCT GGTGAATCGC
ACCAGCAAGG TGCTCGATAT CGCCACAGGC AGAGCCACAT CCGCGGCCTT CCTGGTCAAA
CAATATGGCG CTCAGGTCCT GGGTTTAGAT TTAGGTATGG ATAATCTTCA AACGGCAAAA
CAGACCCATC ACTCACTCAC AAAACTTAAC CTCATCACCG GTGATGCCAT GCAGTTACCA
TTTCAGAATA ACAGTCTGGA TGTGGTGTTT TGTGAATGCG CCCTCTGCAC CTTCGATAAT
CGCGACGCCG CGATGCAGGA GATCTACCGG GTGCTCAAAC CCGGCGGGTT TATCGCAATA
TCAGACATAT TCCTCAATCA GGCTCTGCCC ATAGCGCTGG AAACGACACT CAATCGCTGG
CTCTGTGTCG CTGGGGCACT CAGCCGTGAA ACAAGCATCC AGAAAGCCGA ACAAGCAGGC
TTTAACCAGA TCCATTTCGA AGATAGATCG GCAGGTATTT TAGCCAGCAT AGATTCGATT
AAGCTCAGGT TTGAGGTGCT GGAGAGTCTG ACGCCTCTCA ACCTGGAAGT TGTCGACTCA
CTCTCTCTCA AGGCAGAGGG TAGTATATAC ATTCGGAACT CGCTCAAGCA GTTAGCCAAT
TTCGTTGAAG CCGGGGGAGC GGGTTATTAC ACGATATCGG CAAGGAAATT GCCAAGGCGT
GGCTAG
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| Protein sequence | MNCCTDLYQH PLTHHLLGDS FHPGGLETTR SLAAQCLVNR TSKVLDIATG RATSAAFLVK
QYGAQVLGLD LGMDNLQTAK QTHHSLTKLN LITGDAMQLP FQNNSLDVVF CECALCTFDN
RDAAMQEIYR VLKPGGFIAI SDIFLNQALP IALETTLNRW LCVAGALSRE TSIQKAEQAG
FNQIHFEDRS AGILASIDSI KLRFEVLESL TPLNLEVVDS LSLKAEGSIY IRNSLKQLAN
FVEAGGAGYY TISARKLPRR G
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