| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4036 |
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| Symbol | |
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| ID | 5612710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4944704 |
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| End bp | 4945534 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934991 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475768 |
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| Protein GI | 157377168 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.489025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAAA GGATTCGGTT GACTCTGATA CTTCTCATGC TTGCTATAAG CGTAACAGGC
TGTCACCTCG AGAATGGAAG AGAGCAATTC GATGGATCAT ATAGTATGGA ACCAGTGGAA
GAGATGGCGG GGGATCTCTC TGTCGTCGTT ATTTTTGCTC ATCCGGATGA TGAGACCTGG
ATATCTGGAA CGTTAGCAAA ATTGAGTGAT CATGGCGTAA AAGTCTTTCC GGTATACGCG
ACTTCCGGAG ATGCCGGGAG TGATCATTCC GGGCAAGGGT TATCGGGCTC TGAGTTAGCG
CTGATTCGAG AGCAGGAAGC TATTGCAGCC TCTCAAATAT TAGGCCTTCA GTCTCCGATA
TTTTTGCGCT TACCTGATGG CAAGCTCAAT AAATATTCTG AAGAGATTAT CAAGCAGCTG
AACAGCATAC TCGAACAGGA AAAGCCTACC GCTATTCTCA CATTTGTGGA GGGGGGAATA
ACGGATAATC GAGACCACAA AACGTTGAAT AGATTAGTTT CAGCCCATTT CAATCGGCTT
GCTGGTTACT TTGGTGTCTC CTATTACAGG GCGGAAAGCC TGGCTAAATC GGCCAATAAG
TTTGGCTTCG ATTACAAGGT TGCTATGCCC ATCGAGGACG CAGGTGTCAC GATTCGAGTC
GATGTTTCAT CCTATAAAAC TAAAAGGGTG AAGGCGATGG CAAGCCATAA GACTCAATTC
CCTTCCATTA TGATCAAAGC CTATACTGAT TATGCCGAGT CTGTTCCCCT GGAGGAGATC
ATTACCATTA ATGGGGGGAG CTGCTCTGTT CTGATAAGGC TGTTAGAGTG A
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| Protein sequence | MGQRIRLTLI LLMLAISVTG CHLENGREQF DGSYSMEPVE EMAGDLSVVV IFAHPDDETW
ISGTLAKLSD HGVKVFPVYA TSGDAGSDHS GQGLSGSELA LIREQEAIAA SQILGLQSPI
FLRLPDGKLN KYSEEIIKQL NSILEQEKPT AILTFVEGGI TDNRDHKTLN RLVSAHFNRL
AGYFGVSYYR AESLAKSANK FGFDYKVAMP IEDAGVTIRV DVSSYKTKRV KAMASHKTQF
PSIMIKAYTD YAESVPLEEI ITINGGSCSV LIRLLE
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