| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4028 |
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| Symbol | |
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| ID | 5613989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4936532 |
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| End bp | 4937593 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934983 |
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| Product | peptidase M28 |
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| Protein accession | YP_001475760 |
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| Protein GI | 157377160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000100923 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGTATC CGGCTGCCGT CCAAGAGCAT AGCTTAAACA AGGTAAGGTT AATTACCCAT
ATCCTATCGG CCATCACTCT TATCACCCTA ATTTCCGGCT GCGCTACCGA CACGTCTCCC
TCATGCAGGG CAAGAGTGAC ATCCGACTGG GCCAACACCA AAGACTTGAA AAGTGATATT
AGCCAACTCA CCTCTCCGGC ACTTCAAGGA CGTAAAACCG GGACTCGGGG CGCCAAACTG
AGTCGGGAGT TTATCTCTGT ACGATTTGCA CAGATAGGAC TCACTCCCTG GTTACCCTCG
TCCGGACCTG ACAATGCTGT CGATTATGCA ATCCCCTTTA GCTACGACTA CCAATTCAGT
CAACGTCAGG GGGTTAATTT AGTCGGGGTT CTGAAATCTC CCACACCAAG CAGTCGATGG
CGGATCGTCA TTGCCCATTA TGATCATTTA GGAAAAAAAG CAGGCAAAGT CCATCCGGGC
GCCGATGATA ATGCGTCTGG AGTGGCCGCG ATGCTGCAAA TCGCGGCCCA AAGCGCAGCG
ATGCTGCATA GTGAAGAGCA TAATACAGAA AGAGCAAACT TGATGTTTGT GGCGACAGAT
GCCGAGGAAC CGGGACTCTT CGGAGGTTAT GCACTGGTAG AACGGTTGAA TAATCCAGCT
TCAATTCCCA GCGGTGAACA GATAGAGTTG GCAATAAATT TGGATATGAT CGGCAGGCCG
GGTAGACCCT ATGCTATTTA TCTTGAAGGT AAGAGAGGCT TTAAAAATTT CAACCAGATC
CGACAACGGA TCACCGCAGA AAACAGCTTA TGTATCAAGG CTAACCACCC CGGAGCACTT
GGACGGGAGC TAAAGCGTGT CGATTGGCTC AGAGCGTCGG ATCATTACCC TTTACATAAA
GCCGGGATCC CCTGGCTCTA CTTTGGAGTG CCCCCACATA GGGACTACCA CGCCCCCACA
GACACGACAG AAAAAATAGA TCTTAAATTT CTGGCCGCTG TGACTGAATC AGCCTATCAA
CTGCTGATAA TTAACAGTTT ACTGCTACAA AACACGCCGT AA
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| Protein sequence | MRYPAAVQEH SLNKVRLITH ILSAITLITL ISGCATDTSP SCRARVTSDW ANTKDLKSDI
SQLTSPALQG RKTGTRGAKL SREFISVRFA QIGLTPWLPS SGPDNAVDYA IPFSYDYQFS
QRQGVNLVGV LKSPTPSSRW RIVIAHYDHL GKKAGKVHPG ADDNASGVAA MLQIAAQSAA
MLHSEEHNTE RANLMFVATD AEEPGLFGGY ALVERLNNPA SIPSGEQIEL AINLDMIGRP
GRPYAIYLEG KRGFKNFNQI RQRITAENSL CIKANHPGAL GRELKRVDWL RASDHYPLHK
AGIPWLYFGV PPHRDYHAPT DTTEKIDLKF LAAVTESAYQ LLIINSLLLQ NTP
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