| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4013 |
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| Symbol | |
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| ID | 5611918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4913292 |
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| End bp | 4913867 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934968 |
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| Product | FxsA cytoplasmic membrane protein |
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| Protein accession | YP_001475745 |
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| Protein GI | 157377145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000110243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGTTTTTCT TTCTATTAGT TATCTTCATC TTAGTTCCGG TTATAGAGCT AAACGTACTG
ATCCGTGTCG GTGAGTCGTT CGGGAGCTGG ACCACCATCG GTTTGGTCTT CTTCACTGCT
ATTGTCGGCG TCTCTTTGGT TCGTAGCCAA GGGATCACGA CACTAATGCA GGTGCAGCAA
AAACTTTCAC GAGGCGAAGC ACCCGGTCAG GAGATTGTCG AAGGGATGAT GCTGGCCGTT
GCCGGCCTGC TGTTACTTAT CCCAGGATTT GTTACCGATG CCATTGGATT ACTGCTGCTG
ACTCCCTTGA CCCGCATCCC CGTTGCCGGC TTTCTTTACA AGCGAATGCA GATGAGAGTG
GTCAATAATG GTGGCTTTCA TGGCGGCTTC GGTCCCGGGG GCAATGGTGC TCAAGGTCCC
TTTGGCGGTC ATCAGCCATT TGATGATAGT AAGAGCAAGA ACCCTGAAGG CGGAGATACA
TTCGACGGTG ATTTTGAGCA TAAGCATGAT CCCAGCGACA AGCGTCCGGA AAGCCATCAG
ATAGATGATA AAGAAGATAA AAATCCTAGG AACTAG
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| Protein sequence | MFFFLLVIFI LVPVIELNVL IRVGESFGSW TTIGLVFFTA IVGVSLVRSQ GITTLMQVQQ
KLSRGEAPGQ EIVEGMMLAV AGLLLLIPGF VTDAIGLLLL TPLTRIPVAG FLYKRMQMRV
VNNGGFHGGF GPGGNGAQGP FGGHQPFDDS KSKNPEGGDT FDGDFEHKHD PSDKRPESHQ
IDDKEDKNPR N
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