| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4012 |
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| Symbol | |
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| ID | 5610512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4911460 |
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| End bp | 4913280 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934967 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001475744 |
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| Protein GI | 157377144 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000249675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCTACAA GCCAACAGCC CACACCACAA CTGCAGCACT TCTATATATC TGAAGAGCAG
TCAATCTATC TGCTTAGAGC CGATGATGCG CGTAAACACA GAGCCTGGAT ACGCCTGTGT
AAGCAACAGC TGGGTAAGCT AGGCTATAAG GAGTTGGAGC TCGTTGGTAA AGGCGCTTAT
GGGTTCGTAT TTGCAGGCAT CGACCCCCAA GGCGAGGCGC ATGTTTTTAA GTTTTCACGT
GTAACCTTGC CACAACACGT TCAAGACAGG CTGGAAGAGG AGGCGTTTAT GCTTGCTCAG
GTCAAGCATC CGAATGTGCC TCCCGCTATC AAGTTTGCCC ATGCAGGTAA ACAAGGCATC
TTGGTCATGG CAAGGGCACC GGGTGAGGAT CTCGAACAAC TCTGCTTGAA ACGAGGCGCG
CTGCCTGTGG CTATGGTCAT GAATATCGCC AGGCAACTTG CCAATATACT GCAATACCTG
CATCACGGTC GTCCTTTGGT GCATGGTGAT ATAAAGCCGT CCAACTTAGT CTACGACGTA
AAAACCAATC ACCTCTCACT TATCGATTGG GGGTCGGCGG TTTTTGCCCA GCGAGACGCT
CTGGGTAACC CGGTCAATGG AAATGTGATG GACCTGCTCT CTAATGATCA GCAGCATACT
AACGCCAGAA TGGGAGATGT CTATTTTATT GGAGAGGAGC AACTCAATGG CTCCCTCTCC
AGTACCCGAT TCGATGAACA GGGTGTCGCA GCGACCTTAT ATGCCATTGC ATCGGGTCAG
GCGAGTCGTT TCGGCAGCAA GGTAATAACT GCCACCAGCA TAGGTTTACC CGTAGAGCTG
GCAAAAACCT TAGATGGCAT GCTCAGTGAA AATCCGGTCC AGCGGAATAA AGCAGGGGAT
TACTTCCTGA AGAGCATGCT TCATAGCCAC CGACTTCACC TGCCCGACAT CGATGAACCA
CCGCTGATTG AGGAGATCCC GATTTGGGAG CTCACCCGTG AACGCGATGT AGAGACGGTT
ATCTATAGCT CTCGAAAATC ATTCCTGAAA GAACATAACA CGGAAGATCC CATCGAAAAG
ATGGATGACC TTCAGTTAGA AAAATATTAT CGCAACTTCA TGGCGGGAAT GGGTGATACC
GAGAAAGGGT TTATCGCAGC TGTCGGTCGT ATCGGTCAAT ACTCGATTGT AGGCGGTCTG
GCAATCCACT GGCGAGAAAC CGGCGTGTTT ATCGATTCCA ATCTGGCCCT GTATCGCGCC
GAGGAAAAGG CGGCATTGAC TTTAGCAGTC AACAATATGG TCACTCTGGC CAGAGGAATA
AGAAGGATCG GAGTATTCAA AGCCTGCTTC TTCAATGCCA GAGATACCTT GCACCTTGAA
CGTGATGATA CTACGCAGCC TTTTCATATC GAGCCGGAGC AGCAATTACC TTTCGAGGTC
GGAAGCGTTC CTTCGCTGGA AGATAAATCC CGCTTGCACT CTTACTTCGA GGATGGACGA
GATCCCGATG AAAACCTTGA GCTTCCTTCT GAGATCATAA ATGAACTGGC ATGGATCAAC
AGGATCCATC ATACCGGCTG CATCATCTTC GAGGTCCTCC CTAACCATAT GAAGATCCAC
AGTTACCTAA GGTTATTAAA CCCCAGAAAA CAAGCGGCAT TCCGTGCCAG CCTGGATAGA
ATATTGAGCC ACGTGGATAA AATACAGGGG AAAGGGGTAT CGGGCTTTAT GAAGCTCCCC
TACAAAAATA CCCGAAAGTT CAGCCAGATA GATTGTAAGG AAGAAAACTT TTATCCAAGG
AATCCGAAAA TCAGTTCCTA G
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| Protein sequence | MPTSQQPTPQ LQHFYISEEQ SIYLLRADDA RKHRAWIRLC KQQLGKLGYK ELELVGKGAY
GFVFAGIDPQ GEAHVFKFSR VTLPQHVQDR LEEEAFMLAQ VKHPNVPPAI KFAHAGKQGI
LVMARAPGED LEQLCLKRGA LPVAMVMNIA RQLANILQYL HHGRPLVHGD IKPSNLVYDV
KTNHLSLIDW GSAVFAQRDA LGNPVNGNVM DLLSNDQQHT NARMGDVYFI GEEQLNGSLS
STRFDEQGVA ATLYAIASGQ ASRFGSKVIT ATSIGLPVEL AKTLDGMLSE NPVQRNKAGD
YFLKSMLHSH RLHLPDIDEP PLIEEIPIWE LTRERDVETV IYSSRKSFLK EHNTEDPIEK
MDDLQLEKYY RNFMAGMGDT EKGFIAAVGR IGQYSIVGGL AIHWRETGVF IDSNLALYRA
EEKAALTLAV NNMVTLARGI RRIGVFKACF FNARDTLHLE RDDTTQPFHI EPEQQLPFEV
GSVPSLEDKS RLHSYFEDGR DPDENLELPS EIINELAWIN RIHHTGCIIF EVLPNHMKIH
SYLRLLNPRK QAAFRASLDR ILSHVDKIQG KGVSGFMKLP YKNTRKFSQI DCKEENFYPR
NPKISS
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