Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3999 |
Symbol | |
ID | 5611072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4896767 |
End bp | 4897369 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640934953 |
Product | putative disulfide isomerase |
Protein accession | YP_001475731 |
Protein GI | 157377131 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.136528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTT CACTAACCAC ACTCACTGCA GCTTTATTTA TGACGTTTAC CGCATCAGCC GCAGAAGTAA TAAAGATCGA CACCCCTGCT CTGGACAACA CAGTCCAAAA AATCTACTCC GTTTACTGCC CGTTCTGCTA CAAGTACGAG AAAGCAGTTA CGCCAAACCT AATCAAAAAT CTTCCCGCAG GTACCAAGTT CCAAGCTATT TGCTTAGAGA ACAAAGGTCA GCTTGGCATC GAGGCTTGTG AAGTCTTAGC CGCCGCCCAA ACCATCAGCC ACAAGAAGTA CAAGCAAGCC AAGCTGGCCA TGTACTCCGC AGTGCATGAC CAGAAGCTAA AGAACGTTAA GGGTTCAACT GCAGTCAAAG GGGACCTAGC CGCTATCGGG CTTAAAGCTG CCGGAATGTC TCAGACGGAA TTCAAGAACG CTCTCAACTC ATCTGAGGCA CAAGACAAGC TAGCCTATGA CCGCACTATC GCTCTAACTA TTGCCAAGAA AAAGGGCATA CCGGCCATTG TTATTAGCGG TAACAAAATG ATTGATACCA GCACAATCAC TTCATTATCA AACCTTGATG AAACCATTAA GAAATACCTT TAG
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Protein sequence | MKTSLTTLTA ALFMTFTASA AEVIKIDTPA LDNTVQKIYS VYCPFCYKYE KAVTPNLIKN LPAGTKFQAI CLENKGQLGI EACEVLAAAQ TISHKKYKQA KLAMYSAVHD QKLKNVKGST AVKGDLAAIG LKAAGMSQTE FKNALNSSEA QDKLAYDRTI ALTIAKKKGI PAIVISGNKM IDTSTITSLS NLDETIKKYL
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