| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3978 |
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| Symbol | |
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| ID | 5610419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4865578 |
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| End bp | 4866609 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934932 |
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| Product | rRNA (guanine-N(2)-)-methyltransferase |
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| Protein accession | YP_001475710 |
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| Protein GI | 157377110 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAACTA ATCCATCTCA ACTCATTCTT AGAAATAGCG ATCTATTTGC AGGTCAAAAT
GTATTAGTGC TTAACTATGA AGGCGATCTG CTACCCAAAC AATTATTGGA AAGCGCTAAA
AAAGTCACGG CGCTATCGCT CGATTATCAT CATCACCTGA TTATGAGCCC ATATGCCGAG
CAAAACCTAG CACTTCACTT TGGTCACATG TTGCCCGATG AAGAGCAGTT CGATACGGTG
ATTATCTATT ACCCCAAAGC GAAGGCACTT GCATCCTACC TGCTAAACTT GGCTGGCGTT
CATCTGAAGC CCAATGGCCA ACTTCTGGTT GTCGGAGAAA ATAAGGGGGG GATTCGCTCT
ATCGTCAAAC AGGTACCCGA TTACTTCGAT AGCCCTTTTA AACAAGACAG TGCCAGGCAC
TGCTTACTCT ATGTGAGTCA ACTCGTAGAG AAAGCCCCTC AGATTAACCT CTCAGACTGG
GTGCGAAATT ATCAACTCGA AACCCCTCAA GGAGAGATCA CAATTTGTAA TCTCGTTGGA
GTTTTTAGTG AAAAACGTTT AGATGAAGGA ACAAAACTGC TCCTGTCTCA CTTGCCTAAG
ATGTCTGGCC GAGTGTTAGA TTTTGGTTGT GGCGCCGGCG TTATAACGGC AGCCTTACTC
AAAGCACAAC CTGAGCTAAA AGTTGAATGC GTCGATATCA ATGCAATGGC GATTGAATCT
TGCAAGCTCA CCTTAGCAGC CAATAACTTT ACAGCCGACA CCTACCCTTC AGATGGACTG
ACTCAAACCA AGGGGCTTTT TAATGGCATC ATATCTAACC CTCCATTTCA TGATGGCTTG
AGAAGTACCA CCGACATTGC CAAAAATTTT GTAAAAGATA GTGTGCAGAA GCTTAAAAAG
GGGGGCGTTT GGCATATTGT TGCTAATAGA CATCTTCCAT ATAGTGATTC AATTTCGACG
CACTTTAAGC AGGTAAACGT ATCTGCCGAA AACAACAGGT ACAAGGTTTA TTCGAACAAA
ATCAACAGCT AA
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| Protein sequence | MLTNPSQLIL RNSDLFAGQN VLVLNYEGDL LPKQLLESAK KVTALSLDYH HHLIMSPYAE
QNLALHFGHM LPDEEQFDTV IIYYPKAKAL ASYLLNLAGV HLKPNGQLLV VGENKGGIRS
IVKQVPDYFD SPFKQDSARH CLLYVSQLVE KAPQINLSDW VRNYQLETPQ GEITICNLVG
VFSEKRLDEG TKLLLSHLPK MSGRVLDFGC GAGVITAALL KAQPELKVEC VDINAMAIES
CKLTLAANNF TADTYPSDGL TQTKGLFNGI ISNPPFHDGL RSTTDIAKNF VKDSVQKLKK
GGVWHIVANR HLPYSDSIST HFKQVNVSAE NNRYKVYSNK INS
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