Gene Ssed_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3949 
Symbol 
ID5613860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4827258 
End bp4827617 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID640934903 
ProductDnaK suppressor protein, putative 
Protein accessionYP_001475681 
Protein GI157377081 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.442738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCAAG CCGAACTGAC ATTACCTCAA AAAAGGCAGT TATTGAGCCA GCTCGAGGCG 
CAGCTCATCG AGCTTGAGCA AGAGGTCATC GCTATTCACA GTCGTGGTGC GCCGGTACAA
CTCGACCAAC AAGCCGTCGG GCGGGTGTCA CGTATCGATG CCATACAGCA GCAACAGATG
GCCCAGGCCA ATGAGACTCA GATGAGTCAA CAACTCCTGC GTATCAAGCA GATCCTTCTC
GACCCCGATG AGTATGGGTT CTGCCACGAG TGTGGAGAGA GTATCGGCAT AGGCAGGCTC
ACTATTCATC CCACAGCAGA GCTCTGCATT CAATGCCAGG GGGAATTAGA AAACCTTTAA
 
Protein sequence
MKQAELTLPQ KRQLLSQLEA QLIELEQEVI AIHSRGAPVQ LDQQAVGRVS RIDAIQQQQM 
AQANETQMSQ QLLRIKQILL DPDEYGFCHE CGESIGIGRL TIHPTAELCI QCQGELENL