| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3922 |
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| Symbol | |
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| ID | 5612644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4791812 |
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| End bp | 4792381 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934876 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475654 |
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| Protein GI | 157377054 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1556] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGTA AAGATTATAT TTTGAATGCG CTTAAGAGCT CGGCCATCGC CCCTCAGGCT
ATGCCGGTGT TTAATGTGGC TCCGCGAATT GATGATCTTG TGGGTCAATT TGAGACCAAC
CTTAATACCG TAGCGGGAAC GCTCCATAGG GAAGGCGGGT TAGTGGCACT GCAGCTGAAG
GTTGATGAGC TTATCGCTCA GGGGCTGCAA GTTATCTCTA TGGTGGATGG CATTAAGGGA
AACCGAGCGG TTACCGATAC TGCGCATGAA CTCAGAGATA TCGATTATGC GGTGATCCCC
GGCGATCTAG GTGTAGCCGA GAATGGGGCT ATCTGGGTGA ATAACAAAAA TCTGGGACAC
AGAGTCACGC CGTTTATCTG TGAAAACCTC TTTCTGGTTA TTGAAGCCGA TACGATAGTA
GCCAATATGC ATCAGGCTGC CTCTAAGGTC ACCTTAGAGA AGGGAGAGTT CGGTACCTTT
ATCGCGGGCC CGTCAAAAAC CGCTGATATC GAACAGGCAT TGGTTGTTGG TGCCCACGGC
GCCTGTAGCT TAAACGTATA TCTGGTTTAA
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| Protein sequence | MSSKDYILNA LKSSAIAPQA MPVFNVAPRI DDLVGQFETN LNTVAGTLHR EGGLVALQLK
VDELIAQGLQ VISMVDGIKG NRAVTDTAHE LRDIDYAVIP GDLGVAENGA IWVNNKNLGH
RVTPFICENL FLVIEADTIV ANMHQAASKV TLEKGEFGTF IAGPSKTADI EQALVVGAHG
ACSLNVYLV
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