| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3883 |
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| Symbol | |
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| ID | 5613477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4741037 |
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| End bp | 4742257 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640934837 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475615 |
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| Protein GI | 157377015 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.870607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAA ACTTACATCA GGCCGGGGTC AAGCTGCTTA AGCAGCTAGG CAGACACGCC
GATCTCGTTA TGGATGTCTA CCTTTCGGGC TCTGTGCCTG AAGGGGGGGA GAACGCTGCC
GCGATCGAAA AGTTGCGCAA GAGTGAGATC TTGTGGCGTC CGGAGCCGGA TCAGGAGTTA
CGTCTCAAGC GTTCGGTGCG CGCCCTGCTC GAAGAGGCGC TGAGCGATGA GCGTAATCGT
CAGATCGATT CCAATGTGGG CTCCTCGTTA GCTAGCATCA AGACCTTGGC CGAACATTAT
AAAGAGGCAC GCCATAACGT CGATTATAGT GCTTCAGAGG CCTATTTAGC CGACTTGAAT
GAGCATGTTT ACAGTTTCGC CGAAGGGCTG AGATACTCGA TACGTGTGCT CTGGAGTCGC
ATCAATAACG AATTTGGTTA TGTCGGTACC ATCAACGCCA AGATCCGTGA AAATGAGTTA
GCCCAAGCCC AAGTGACTGA GCTGCTCAAC GGCTTGGAGA TGTTCCAGTT CAGTGAGCTG
GGTGAAATAG CGGGGGACAT TCGAGAACTG CGAAAACTCC TGGTCACCAG CCTGCAAGAG
ACCCTGAGTG ACTGTACCCA GGAACTTAGC GTCGTTCAGA GCCGATTGCT CGAATTACTA
GGGCGGTTCC GCCAAATAAG AGGGCGAACT CGTCTGCTTA AGGGCTGGCT GCTTTATACC
GATCTGCATC CTGATTACGC TCCAGCCGAT CATGTCAGCC ACAAGCAGTT GCCGACGCTA
TTTAATCGCG CGGAAGCCAT CCTGGCACCT GCAGCGGTAG ATGTTCATAA CACAGGTTAT
GAGCCCGAGC TGTTAGATAT CGTTTCGCGC ATTAAAGCCA TCGCTCGCAC GAGCCATGAT
CCTCAGCTTC GCGAGCATGA TGTCAGTGTC TCCCTGAGCC AGGCGGAAGA TTTTGATATT
CCGGATAACC CGCTGAAACT GGCCGTCGAT GAGTACTTCT GCTCGGTTAT CGATTCGGGA
CGCAATCAAT CGGCGTTGGA GTATCTGGAT GAACAGGAAC TGCCCTGGGA GAGGGAGAGT
TGGCTCTATC AGGTTATCTG TGGCTATGAA GGTCTTCCCG AGGAGCACAG GCACTACTTT
GAACTGGAGC CTATCGGTGA GCCCGATCCG GTCTACACAG GTAACTTTAT CATTCGGGAT
GTAGAGATCT GGCTGGCTTA A
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| Protein sequence | MSTNLHQAGV KLLKQLGRHA DLVMDVYLSG SVPEGGENAA AIEKLRKSEI LWRPEPDQEL
RLKRSVRALL EEALSDERNR QIDSNVGSSL ASIKTLAEHY KEARHNVDYS ASEAYLADLN
EHVYSFAEGL RYSIRVLWSR INNEFGYVGT INAKIRENEL AQAQVTELLN GLEMFQFSEL
GEIAGDIREL RKLLVTSLQE TLSDCTQELS VVQSRLLELL GRFRQIRGRT RLLKGWLLYT
DLHPDYAPAD HVSHKQLPTL FNRAEAILAP AAVDVHNTGY EPELLDIVSR IKAIARTSHD
PQLREHDVSV SLSQAEDFDI PDNPLKLAVD EYFCSVIDSG RNQSALEYLD EQELPWERES
WLYQVICGYE GLPEEHRHYF ELEPIGEPDP VYTGNFIIRD VEIWLA
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