| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3882 |
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| Symbol | |
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| ID | 5613476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4739244 |
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| End bp | 4740518 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934836 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001475614 |
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| Protein GI | 157377014 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT CACTTTCTAC GCGGATCTTT ATCGGTCTGT TCTCCGGATT AATATTCGGC
TCCATTATTC AATATCTTCT CGGCGATATC GGCTTCTTTT CCGGTACTGT GGTCGAACTC
TCCTCCGGTG TCGGCACCAT GTTCGTCAAT ATGATCATGA TGTTGGTCGT GCCGCTGGTG
TTTGTCAGTA TCGTATGTGG TGTTTTGGAG CTTGATGACC TTAAGAGCTT CGGTCGTTTA
GGCGGGAAAA CATTTGGTTT CTACATCATC AACACGCTAG TCGCAATATT TGCGGCATTG
ACAGTGGCAC TCCTACTACA GCCAGGATTA GGGGTAGATA TGTCAGGTGG TGCGGGTGCT
GAAATTACCG CAACAGAGCT CCCTAATCTG GTTCAGCTCA TCGTTAATAT CGTGCCTAAT
AATCCGGTCG CGGCTTTCAC CTCGGGTAAC ATGCTACAGG TCATCTTCAT GGCACTGCTT
ATTGGCGGCG TGATTAAGTC TCTGGGCGAT GCCGTACCTC TGTTGGTTCA AGGGTTTCAG
GAAGGCAATA AGCTGATGAT GAAGCTGATT ACTATTGTGA TGCAGCTGGC TCCCATTGGT
GTTTTCGCCT TGATGCTGAA GCTGGGTGCA ACACTCGAGG CGAGTATATT CCTGAGTGTA
CTCGAGTATC TGGTGGTTAT CTTAGGCCTG TTGTTGACGT GGATCTTCAT CGTCTACCCG
ATGGCGGTCG GTGCCTTTAC TTCCGTATCG GCGAAAGAGT TCAGGGCTAA AACCCGGGAG
CAGATCTTGT TCTCACTCTC TACAGCAAGC TCGAATGCTA CCATTCCTGT GACCATGCGA
ACCTTGACCG ATAAGTTAGG CGTTAAGCGT GCCATTGCGG GCTTTGGTGT CCCCCTTGGG
GCGACCATGA ATATGGGCGG CGTGTCTATC TATATCACTA TTGCCATCTT CTTCGTTGCA
AATGCCTTCG GCGCACCTAT TGCGATGGAT CAGCTTCCCG CCTTGTTATT TAGCATCTTC
CTGCTGTCGG TGGGGGCCGG TGGTGTTCCC GGTGGCGGAA TGGTGATGAT AGGTGTGCTC
ATTCACCAAA TGGGCCTGCC AGTAGAAGCA TTCGCCATTG TGGCAGCGTT AGATAGGCTG
ATCGATATGG TGCTGACATC GTGTAACGTG GTTGGTGATG CGGCTGTCCT GACTATTGTC
GATGAAACCG AGAAAGGTGT CGAGGTTGAG CGCACTGCTG AAGCTCTTCC GGTTCAGGAA
ACCAACCGGG CATAA
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| Protein sequence | MTKSLSTRIF IGLFSGLIFG SIIQYLLGDI GFFSGTVVEL SSGVGTMFVN MIMMLVVPLV
FVSIVCGVLE LDDLKSFGRL GGKTFGFYII NTLVAIFAAL TVALLLQPGL GVDMSGGAGA
EITATELPNL VQLIVNIVPN NPVAAFTSGN MLQVIFMALL IGGVIKSLGD AVPLLVQGFQ
EGNKLMMKLI TIVMQLAPIG VFALMLKLGA TLEASIFLSV LEYLVVILGL LLTWIFIVYP
MAVGAFTSVS AKEFRAKTRE QILFSLSTAS SNATIPVTMR TLTDKLGVKR AIAGFGVPLG
ATMNMGGVSI YITIAIFFVA NAFGAPIAMD QLPALLFSIF LLSVGAGGVP GGGMVMIGVL
IHQMGLPVEA FAIVAALDRL IDMVLTSCNV VGDAAVLTIV DETEKGVEVE RTAEALPVQE
TNRA
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