| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3820 |
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| Symbol | |
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| ID | 5613280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4652192 |
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| End bp | 4653373 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934774 |
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| Product | flagellar biosynthesis protein, putative |
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| Protein accession | YP_001475552 |
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| Protein GI | 157376952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00128187 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000153711 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAGCG CCATTGTTAC ACCTAAGTAT GTCAGTGATT TTAGCTGTAT AGGCCCGGAT
TGCGAAGACA GCTGCTGTAT CGGCTGGAAT ATCTATATCG ATAAAAAAAG CTACAAGAAG
ACAATGGCCC ATCCTCAGTT GAAGGGGTTA GCTAAGTCGG CCCTGAAGAA GATAAAACGC
AGTGATGACC AGTGGGCCAT AGTACGGACC GATGCTACAG GTGTTTGCCC TTTTTTAGAC
AGCAAGAAGC TTTGTAAGAT CCATTCTATA GCGGGTGAAG AGACTCTTAG TGCCACGTGT
AGAACTTATC CAAGGCTCAC GGTCATCAGA GAACATGATA AGTTTGACAG CCTTTCCTTG
TCATGCCCGG AAGCTGCCAG GCTGATACTG TTCAGCCCCG ACGCCTTTAT ATTTGAGCGT
AAGCTTTCTG GTTCCTGGCA AACACCACAC TCGAGTCCAC TATGGGTTAC TAAGACATAT
GACTACAGCA TCGAGTTGCT GTTAAACGAC AAGCTTAATT GGCAGCAAGC ACTACTTACT
ATAGGATTTC TGATTAATTC GGCCGATAAG GTGTGGCAAA ATGAAGCGCC GGCCAGTGTA
TTGGATAGCC GCTTCGAGCA ATTGTCTCTG CTGGCTGAGC AAGGTGTTCT ACAGGATCAA
TACCAAAGCT TATCTTATGT TTGTGGTCAT CAGGTTCAGG CATTCGCCGC AATTCATGGT
ATGTTCATCG ATGCACATCC AAGGCGTGAC GGAGTTAGAT TCGGAATGAT TAATGATGCC
ATCAGTGCCA TGTTAAATGA CGATGAAACC CTTGATATCG AGAGAATTAA CCGAGCGTGG
AACGATATCG CGTCACCGGC ATTAGATGAG CATGGAGACA TCTTTAAGCG ATACCTCCTC
TATTATATGT ATCACGAATA CTTCCCGACC ACTCTGGATG ATAAACCACA ATCAGCCTTC
AGATTGATTG TGCTGGATTG CTTTATTTTG CGCTGCTACT TAGCTGTCAT TGCAAATAAG
AATAACGGCT TATCGGAGAG TGATATCATT CTCTGCTTTC AGGTATACCA CGTCGTTCGT
CAACATAAGT CTACCTTTAT TAAGGGAGCC ACAGAGATAA TGGAGAAGTT TAGCTTCTCC
AATGTGGCTG GCATTATCAG CCTGCTTAAG ACTCAGGATT AG
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| Protein sequence | MDSAIVTPKY VSDFSCIGPD CEDSCCIGWN IYIDKKSYKK TMAHPQLKGL AKSALKKIKR
SDDQWAIVRT DATGVCPFLD SKKLCKIHSI AGEETLSATC RTYPRLTVIR EHDKFDSLSL
SCPEAARLIL FSPDAFIFER KLSGSWQTPH SSPLWVTKTY DYSIELLLND KLNWQQALLT
IGFLINSADK VWQNEAPASV LDSRFEQLSL LAEQGVLQDQ YQSLSYVCGH QVQAFAAIHG
MFIDAHPRRD GVRFGMINDA ISAMLNDDET LDIERINRAW NDIASPALDE HGDIFKRYLL
YYMYHEYFPT TLDDKPQSAF RLIVLDCFIL RCYLAVIANK NNGLSESDII LCFQVYHVVR
QHKSTFIKGA TEIMEKFSFS NVAGIISLLK TQD
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