| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3810 |
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| Symbol | |
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| ID | 5613601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4643738 |
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| End bp | 4644217 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934764 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001475542 |
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| Protein GI | 157376942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00990238 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGC GCTCAAAAGT TCAAACTGAG CAAACGATAA ACCAAATTCT TGACGAGGCG
CTAAATCAGA TCCTTACTCT TGGCTATGAG CCTATGTCAT ACACAACCCT ATCCGATGCG
ACGGGGATAA GCAGGACAGG TATTAGCCAC CACTTCCCAC GTAAAGTCGA TTTTCTGACC
CGGTTAGATC CTAATATTGC CCGGTTATTT ATTCGTGAGT TAGACTTCTC GGGTTTACCT
CAGCTGGAAG AGTCCTGGAT GACGGCGTTA GCAGAGCCAA CCAATGCTGC GATATTGAGA
CTGTTTTTTA GCTTGTGTGG TTATTCCGGC AATGAAGTTA CCCTATTTCG AGCGGTCAGT
CAGACCAAGG AAACGGCTAT ATCAGAATTG GGCGAGGAAG GGGAGAAGCT TGTCAGTGAT
CTGTTGGGCA GAAGTGCAGT AGTCTTGCTT GCTCAAACCG CAGAAGCCGA GGCGGCTTAG
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| Protein sequence | MAKRSKVQTE QTINQILDEA LNQILTLGYE PMSYTTLSDA TGISRTGISH HFPRKVDFLT
RLDPNIARLF IRELDFSGLP QLEESWMTAL AEPTNAAILR LFFSLCGYSG NEVTLFRAVS
QTKETAISEL GEEGEKLVSD LLGRSAVVLL AQTAEAEAA
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