| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3805 |
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| Symbol | |
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| ID | 5610739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4636910 |
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| End bp | 4637677 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934759 |
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| Product | phosphoadenosine phosphosulfate reductase |
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| Protein accession | YP_001475537 |
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| Protein GI | 157376937 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02057] phosphoadenosine phosphosulfate reductase, thioredoxin dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.103043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACT CTATAAAGGT GGAGTCCATC GTCTCTGCCG ATGAACTTCT GGCGTTACTG
AGCGCGCCTC AAGTTGAGCA AAAGCTTGAG CTTGAGCGTA TTAATCAGTT TTTGGCTGAA
TTAAACCCGG CTCAGCGGGT CAGTTGGGGG CTCGATTACC TACCGGGTAA TCATGCTCTA
TCCTCAAGTT TTGGGATCCA GGGTGCCGTT ATGCTGCATC TGGTCAGTGC TCAGAAGGCC
GATATACCTG TGATATTGAC GGATACCGGT TACCTATTTT CCGAGACTTA TCGGTTTATC
GATGAGTTAA CCGAGCGATT AAAGCTAAAC CTTAAGGTCT TTGCATCGCC GCAGACACCG
GCTTGGCAGG AGGCGCGTTT CGGTTTGCTG TGGGAGAAGG GCTTAGATGG CCTGGATCAA
TATAACAGGA TGAACAAGGT CGAACCTATG CAGCGAGCCT TGGGTGAGTT GGAGGTGGGG
ACCTGGTTTG CAGGGTTGCG CCGTTCTCAG TCGAGTACTC GTGAGGCGCT GCCTATTTTG
GCTATCCATG GTTCGCGCTA TAAGATCTTG CCTATCCTGG AGTGGAGTAA TAAAGATGTG
CATGAGTACC TCACAGAACA CTATCTTCCC TACCATCCCC TCTGGGAGAA AGGTTATGTC
TCGGTAGGAG ATGTGCATTC CAGCAAGCCG CTGGAACTGG GCATGAGCGA AGAGGAGACT
CGTTTTAACG GTTTGAAGCG GGAGTGTGGT CTGCATTTCG ATATCTGA
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| Protein sequence | MTNSIKVESI VSADELLALL SAPQVEQKLE LERINQFLAE LNPAQRVSWG LDYLPGNHAL
SSSFGIQGAV MLHLVSAQKA DIPVILTDTG YLFSETYRFI DELTERLKLN LKVFASPQTP
AWQEARFGLL WEKGLDGLDQ YNRMNKVEPM QRALGELEVG TWFAGLRRSQ SSTREALPIL
AIHGSRYKIL PILEWSNKDV HEYLTEHYLP YHPLWEKGYV SVGDVHSSKP LELGMSEEET
RFNGLKRECG LHFDI
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