| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3804 |
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| Symbol | |
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| ID | 5612042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4634239 |
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| End bp | 4635987 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934758 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475536 |
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| Protein GI | 157376936 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.978239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TATTAATTGC AGCAGCCGTG GTCGCCGCAG GTGCGGGTGG ATATTGGTTG
AGTCAAGATA AGCCAAGTTC TGTTTCCAGT CAGTCTGATA CCGTTCTGGC CTCTGTTCCT
GCCGATACTC CGCTATTTTC CGGTCAGCTG AAGCCTTTTC CAATCAAGTC CTATGTGAAC
TCTCTTTCCC AAAGCTATAA GACTGCCCCA GCTGAGCTTT TTGCAGAGTT AGAGCAGTCT
GATGACGCGA GAGCTAAGTT TCTTTTGAGC CTGAGCCGAT CATATATGGA CAGCCTGCAA
AGCGGTGAGC AATTTATTGC GACCTTTGGT TTATCGGAAA AGATCCGCAG CTATTTCTAT
ACTCTGGGTA TCTTGCCCGT AGTTAAATTT GAAGTGGAGA AGCCTCAGGC TATATGGACC
TTACTCGATA AGGCCGAATT AGACAGTGGC TATAGCCATG AAATCAGAAC GCTGAAAGGC
CAGGAATATC GTGTCTATAC CCTAAGTGAT ATAGGTGAAC CCGATAAGTT AGAGCTCCTG
ATTGCTCAAA AAGATGGCTT GCTGACGGTA ACCTTAAATA GTGCGTTTAT CGATGAGCCT
ACTCTGGAAA CGGCCTTAGG TGTTCGGCCT GTGGCTCAAT CACTGGCCGA CTCAGGAATT
ATTGAGCAGA TCATTAAAAC TCATGGTTTC AGCGATGAGG CGATCGGCTA TCTGAATCAT
CAGGAGATAG TCAAAGCGAT CACCACGAAA GAGGGCAATC AACTGGCTCA GCAGATAACG
GCTTTCTCAG CTCAAGAGGG TGAAGATCTG CTTGCCGAGT TCAGAACCCC TGAGTGTCAC
AAAGAGTTCT CCGCTATTAC CGCCAACTGG CCGCGTACGG TATTTGGGGT AAATAGTGTC
AATATCGTGG ATAAGCAGAG CAGCTTCGAT ATCTCAACGA TCGTAGAGAG TAAGAACCAA
ACCTTGCTCA ATGCCTTTAA AAAAATGCGT GGTTTCATAC CCGATTACGC TAAAAACCCG
GGTGACTCAG TATTTTCAAT GGGAGTGGGC ATCGAGCTTA ATCAACTGGT GCCATCATTG
ACTGCCGTTT GGGATGAGCT ACTGCAACCA CAATATCAGT GTCAGGTTCT GCAGGAGTTT
CAGCAGGAGT TATCGGGTCA GAGCCCGGCA ATGCTAGGCA TGTTTACCGG CATGGCAAAT
GGAGTCAGAG GGGTAAGTGC CGCGCTTATT GATTATAAAT TTACCGAATC ATCGGCTTCA
GAGCAGGGCG AACCAAGGTT AGAGAGTATC GATGCCATCG TGAGCTTGTC TGCCGATAAT
CCCAGTATGT TGTTTAATAT GGTGAAACCT TTCGCTCCCG AGTTAGCCAA TATTCAACTG
CCTCAAGATG GTAGCGTTAT CGACCTCTCG CATCTGCTAC CTTTACCGCC TGAATATGGG
ATTCAGCCTA AGATGGCAGT AAAAGGCAGT CACCTGGTGT TGTTCAATGG TGATAAGGCG
GAGGCCATCG CCGAACAGCT GGCCGCAGAA CCGCTTACCG ATAATGGCCT GTACAATATT
GCTTTAGATT ATAAAAAGTT ATTCACGCCA ATCGTGACCT TGGCAGAAAT GACGGGAGAG
CCGCTTCCCG AAGAGCTCTC TATGATGAAA GATTATGATA TGCAGGTGAA AATGGGCGTG
GATATCAATG AGCAAGGCAT CGTTTTTGAC TCATATATCA ATAACAAAGT TACACCAGCG
GAAGAGTAA
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| Protein sequence | MKKILIAAAV VAAGAGGYWL SQDKPSSVSS QSDTVLASVP ADTPLFSGQL KPFPIKSYVN
SLSQSYKTAP AELFAELEQS DDARAKFLLS LSRSYMDSLQ SGEQFIATFG LSEKIRSYFY
TLGILPVVKF EVEKPQAIWT LLDKAELDSG YSHEIRTLKG QEYRVYTLSD IGEPDKLELL
IAQKDGLLTV TLNSAFIDEP TLETALGVRP VAQSLADSGI IEQIIKTHGF SDEAIGYLNH
QEIVKAITTK EGNQLAQQIT AFSAQEGEDL LAEFRTPECH KEFSAITANW PRTVFGVNSV
NIVDKQSSFD ISTIVESKNQ TLLNAFKKMR GFIPDYAKNP GDSVFSMGVG IELNQLVPSL
TAVWDELLQP QYQCQVLQEF QQELSGQSPA MLGMFTGMAN GVRGVSAALI DYKFTESSAS
EQGEPRLESI DAIVSLSADN PSMLFNMVKP FAPELANIQL PQDGSVIDLS HLLPLPPEYG
IQPKMAVKGS HLVLFNGDKA EAIAEQLAAE PLTDNGLYNI ALDYKKLFTP IVTLAEMTGE
PLPEELSMMK DYDMQVKMGV DINEQGIVFD SYINNKVTPA EE
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