| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3788 |
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| Symbol | |
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| ID | 5612850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4617225 |
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| End bp | 4618274 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934742 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001475520 |
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| Protein GI | 157376920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGACCGC AAGTGATCCA TCTTGTCGAT GATAGCAAAT TGGGTGGCGT CAAGTTGGCG
CTCGAGAGCC AGTCTGAATC AAGCCTGAAG CAGACGTTTG ACTTTAAGAT CTGTATCCTC
AATCTACACT CCTGGTTTCC CAGACGCTAC AGCGCAGATA TTATCTGCCT GCACGCCGCC
GCTTCCTGGC GAAAGCTACC CGGCCTCTGT CTGCTTCGTC TGGCCAACAT TGGAACGCCA
CTCCTCTATC AAGAGCATCA CTACAGTGAA TACTTCGTTA AGCATAGAGT CGCCAAGTCC
TGGCGCTTCT TGCTGATGCT GAGGCTCTGT TACCGATTAA TGACTCGTGT ACTGTCTGTG
TCGGATGCAC AAGCCAATTG GATGAAGAGG GAAAGGCTGA CGAGTCAAGA CAAGCTCATT
GTGATGGGGC AGGCAAAGGA TGTGACCCCG TTTTTGATGT TGTCGGCTAA GCCCATTGGT
AGGCCTGTCG TACTCGGCGC CTATGGGCGC TTCGATTCCC AGAAGGGGTT TGATCTCCTG
CTCGAGGCTA TGACTCAACT TTCACCTGAA AAGGTTGAAC TCAGGTTAGC AGGCGGGGGA
GAGGAGTTAG AGGAGCTCGA AACAAAATGG GCGAACCTGC CCCATGTGCG CTTTGTCGGT
GAGGTCCATG ATGTGCCTCA ATTCCTATCC GGATGTGATG CCGTAGTGAT ACCGTCACGC
TGGGAACCTT TTGGTCTGAC TTGCCAGGAG TCTTTAACCG CAGGAAAAAC CATTATCACC
AGTGGTGTCG ATGGGCTCAA TGAGCAGCTC GAGGAGATCG AATCATTGGG GCTGAATCGA
ACCGGGGACT TGATAAGGCT TGCCGAGCTG ACCCCTGAAA AGATCGTTGA AGCGATCGAT
AAATTGATTG ATCGCGCCGA AGCGCTGCTT GGTGACAACA AAGAGTCGAA TGCGTCACTG
GGCTTGAGTC GTCAAGCAAG ACAGATAGTG GCGGCGCGTT GGCCGGTATT ACTCGAAAAG
TGGCGTGAGG TGTTGAGTAA GCATCTATGA
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| Protein sequence | MRPQVIHLVD DSKLGGVKLA LESQSESSLK QTFDFKICIL NLHSWFPRRY SADIICLHAA
ASWRKLPGLC LLRLANIGTP LLYQEHHYSE YFVKHRVAKS WRFLLMLRLC YRLMTRVLSV
SDAQANWMKR ERLTSQDKLI VMGQAKDVTP FLMLSAKPIG RPVVLGAYGR FDSQKGFDLL
LEAMTQLSPE KVELRLAGGG EELEELETKW ANLPHVRFVG EVHDVPQFLS GCDAVVIPSR
WEPFGLTCQE SLTAGKTIIT SGVDGLNEQL EEIESLGLNR TGDLIRLAEL TPEKIVEAID
KLIDRAEALL GDNKESNASL GLSRQARQIV AARWPVLLEK WREVLSKHL
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