| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3758 |
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| Symbol | |
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| ID | 5609827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4578775 |
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| End bp | 4580028 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640934712 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475490 |
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| Protein GI | 157376890 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGGG GATTGTTAGT TTCACTGATG TTACTACTGT GCACGTCGGT TTATGCAGCC
GATAAATGCG TGTCATGCCA CCAGGAGGTC ACGCCCAACG CCGTTAAGGA CTGGCAACTT
AGCCGCCATA GCGAGAATGA TGTGAGCTGT GATACCTGTC ATGAGGGGGA CCATTCATCG
GCTAAGGATG TAGACAAGCT GGTCACCATT ACTGCCGAAA CCTGTGGCGG CTGCCATGGC
GATCGCCTGG ATCAATTCTC TAAGGGTAAG CACGCCCTGG CATGGGCAGC AGTCAACGCT
ATGCCCACCA CTCATGCACA ACCTATGGCA CTGAATCAGG GGATGAAGGG CTGTACCGGC
TGTCATAAGT TGGGGATAAA AACCGATGCC GAGATCGCCA AACTCAAGGA GCAGGGCAGC
AAGTTCGGCC ATGCCTCCTG CGATGCCTGC CATACCCGCC ACACCTTCTC GGTAAAAGAG
GCACAACAAC CCCAGGCCTG TCAGACCTGT CATATGGGCT TCGATCATCC GCAATGGGAG
ATGTGGTCAT CGTCCAAGCA TGGTGTGCGT TATCTGCTGA AGCAAAATGG CGTATTGCCC
GAAGGCACTC CTGCACCAAC CTGTCAGACA TGTCATATGG TCGATGGCGA CCATGAAGTG
CGAACTGCCT GGGGCTTCCT GGCGGTGAGA TTGCCGCTGC CTGAAGATGA TGAGCAGTGG
AAAGCCGATC AGATCACCAT CTTGCAGGCA TTGGGTGTGC TCGATCCTAA GGGACAGCCC
ACCGGACGAC TCGACGTGAT CAAGGCGGCC GATGTTGCCC GTCTGGATAA GGCATCGTTT
GATAAGGAGC GCAACAAGAT GCTGGCCGTC TGCGGTGATT GTCACTCAGC GAACTTTGCC
CGCAACGAGC TCGATAATGC CGATAAGCTG ATCCGCGACC TCGACCATCT GCTGGCACAA
GCTATTCGTA TCATCACGGG ACTATACCAA GACGGCATCC TCACTAAGCC AGAGGGCTAC
GCCTATGCCT TCCCGGATCT GTTAACCTTC CAGGATGCGC CGACCACTAT CGAACAAACC
CTGTTTGAGA TGCACCTCAA GCACCGCATG CGCGGCTTCC AGGGCGCATT CCACGCCAAC
CCAGACTATG CGCTATGGTA CGGTTGGAGT GAGATGGTGA GAGATCTGCA GGAGATAAAA
GAGAAAGCGG CAGAGATGCG TGCGGCTCAC GGCAAGTCGG CCTCAGCTCA CTGA
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| Protein sequence | MMRGLLVSLM LLLCTSVYAA DKCVSCHQEV TPNAVKDWQL SRHSENDVSC DTCHEGDHSS
AKDVDKLVTI TAETCGGCHG DRLDQFSKGK HALAWAAVNA MPTTHAQPMA LNQGMKGCTG
CHKLGIKTDA EIAKLKEQGS KFGHASCDAC HTRHTFSVKE AQQPQACQTC HMGFDHPQWE
MWSSSKHGVR YLLKQNGVLP EGTPAPTCQT CHMVDGDHEV RTAWGFLAVR LPLPEDDEQW
KADQITILQA LGVLDPKGQP TGRLDVIKAA DVARLDKASF DKERNKMLAV CGDCHSANFA
RNELDNADKL IRDLDHLLAQ AIRIITGLYQ DGILTKPEGY AYAFPDLLTF QDAPTTIEQT
LFEMHLKHRM RGFQGAFHAN PDYALWYGWS EMVRDLQEIK EKAAEMRAAH GKSASAH
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