Gene Ssed_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3745 
Symbol 
ID5609742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4560472 
End bp4560717 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content36% 
IMG OID640934699 
Producthypothetical protein 
Protein accessionYP_001475477 
Protein GI157376877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAATG AGAATCATGC GCTTATTTTC GACTTCCCGG AATTTAAACA AGACATTGTA 
TATCTGAATT ATAAAGACGA AGCCTTCAAG AAATTATCCA AACAGTATCA CCTATTAGAT
TACGATATTC GTCAGCTGGA AATTGATGGC AGTCCAACCG ATGACGAGCA TATGCACCAG
CTCAAATTAC AACGCGCTAA TTTGAAAGAC GTATTATTCC AAAAGTTAAA AGAACACCAC
GAGTAA
 
Protein sequence
MLNENHALIF DFPEFKQDIV YLNYKDEAFK KLSKQYHLLD YDIRQLEIDG SPTDDEHMHQ 
LKLQRANLKD VLFQKLKEHH E