| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3725 |
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| Symbol | |
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| ID | 5610667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4532225 |
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| End bp | 4532704 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934678 |
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| Product | protein of unknown function DUF395, YeeE/YedE |
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| Protein accession | YP_001475457 |
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| Protein GI | 157376857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2391] Predicted transporter component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.905098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.214665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA GTTCCATGAA AAGAAAGATC ACAGCTTTAC TCTCCGGTAT CCTGTTTGGA
GCCGGCCTCT TGCTATCGGG TCTGGCCGAC CCGGCTAAGG TGATAGGGTT TCTCGATGTC
AGTCGTGTCT CAAACGGCAC CTGGGATCCG TCACTTATGG TAGTGATGAC AGGTGCTTTG
GCCGTTTATA TGTCACTGTA TTATCTCGTG GTTAAGCCTA GGGTTAGGGC AAACCTTGCT
CCAGTATGTG ATACAAAGTA TCACTTGCCT GAAAAGAAAA CCTTAGATAG TCATCTGATT
TTAGGAGCGA GTCTGTTCGG ATTAGGTTGG GGTATGGTGG GGATCTGTCC GGGCCCGGCT
ATCGTCAACA TTGCCACTCT CGATATGAGC CTTGGCCTGT TTGTCGTGGC CATGCTGTTC
GGTCTCTATA TCGGCAAACT CATCAAATCA GCTGAAGTCG ATATGGTAAA GGCGGATTAA
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| Protein sequence | MKTSSMKRKI TALLSGILFG AGLLLSGLAD PAKVIGFLDV SRVSNGTWDP SLMVVMTGAL
AVYMSLYYLV VKPRVRANLA PVCDTKYHLP EKKTLDSHLI LGASLFGLGW GMVGICPGPA
IVNIATLDMS LGLFVVAMLF GLYIGKLIKS AEVDMVKAD
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