| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3717 |
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| Symbol | |
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| ID | 5610265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4522673 |
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| End bp | 4523248 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934670 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001475449 |
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| Protein GI | 157376849 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC CAGATAAAAA ACAGACCATC TTAGACACAG CCTTGACACT ATTTGTCAGC
CAAGGCTTCT ATGCGACTTC GACCGCCTCG ATAGCCAAGC AAGCTGGTGT GGCGACCGGC
ACCCTGTTTC ATCACTTCCC CTCGAAGGAT GAACTGATGA ATCATCTGTT TTTAACGATA
AAGCAAGAGT TCGCCAACGA GATCCAGGCT CAGATAAAAG ACAGTGGCGA TCTCAAGCAG
GACGCCGAGC ACCTCTGGTG TAGTGCCATA CAATGGGCCA TGGATAACCC ACTTAAGCAG
GAGTTTTTCC AGCAGTACTC TATGTCACCG TCTATCGCCA TAGAGATCCG AGAACAGGCC
ATGAATGGCA TCTTAGGTTT CATGGGCGCG CTGTTACAAC AGGGGCAAGC ACAGGGGCTA
CTCGCAGCTT ATCCACTGGC CCTGATGCAA GATAACTGTC ACGGCCAATA CCTCGCCGCC
ACCCGCTTCT TCCTCGATAA CCCACAAACC TGGCAAGACA AGTCCCACCG ACAAGCCAGC
TTCGCCCTAT TTTGGAATGC GATGGCTAAG AGCTGA
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| Protein sequence | MSKPDKKQTI LDTALTLFVS QGFYATSTAS IAKQAGVATG TLFHHFPSKD ELMNHLFLTI
KQEFANEIQA QIKDSGDLKQ DAEHLWCSAI QWAMDNPLKQ EFFQQYSMSP SIAIEIREQA
MNGILGFMGA LLQQGQAQGL LAAYPLALMQ DNCHGQYLAA TRFFLDNPQT WQDKSHRQAS
FALFWNAMAK S
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