| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3712 |
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| Symbol | |
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| ID | 5612057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4518181 |
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| End bp | 4519026 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934665 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001475444 |
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| Protein GI | 157376844 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA GATCGATTAA ATACTTTCAA TCAGTGTATG AGCAGGGCAG CATCACAGGC
GCAGCGCGAC AGTGCTTCGT TTCTCAGCCT TCGATCACAG CAGCGATTTC ACAGCTGGAA
CAAGAGCTCA ACATCGAGCT GTTTGTCCGT CATGCGGGAG GTGTCAGGCC CACATCTGCG
GCGGATAAAC TCTACCCTCT AGCCAGAGAG ATGAGTGATA ACGAACAGTC AATTCTGCAT
CTATTCAGCG ATGGGCCCAC ACCTATTCCC CTGCGTCTGG GGCTTATGCG TTCCTTGGGG
GCCCAGCGCA TGAGCGAACT GCTTACCGAG CTGACTAAGC GCATAGATAA CCTGGAACTC
ACCCTGGTAG AACCCGATGA GCCCTGCGAT GCGCGAGTGG TCTTATCTCA GTCTGCATCG
AGTTGTGAGG ATTTTATTCC TATCTGGGAG GACAGTTATC AACTTGCCAT CCCTAATGGC
TGGCCACTCG CCGGTAAACC ACTGGTCTCT ATCGAAGATC TCGACGGTAT CCCCTTTATT
AACCGCACTC CATGCGATGC GCTGGATAGA TTAAAACAAG CCATGGCAGT TGAGGGGGTT
CAGTTTCAGC CCAGAGCCAA TATCCGTACC ATAGAATATA CCTGGCCTAT GGTCAGTGCC
GGTGTCGGCG CCGCCCTACT ACCGGACTGG CAGGAGATAA AGCATAACGA TGGCTTCGTG
TTACGTCCCA TTGCAAACGA GAAACTCATG AAGCGGATAG GGCTGGCCTA TAATGCCAGC
AGGATAGACG AGCCTTTGAT AGCCTCGGTG ATATCGGTAT GTAGATCTAC GGCAAGGCAG
ACATAG
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| Protein sequence | MKLRSIKYFQ SVYEQGSITG AARQCFVSQP SITAAISQLE QELNIELFVR HAGGVRPTSA
ADKLYPLARE MSDNEQSILH LFSDGPTPIP LRLGLMRSLG AQRMSELLTE LTKRIDNLEL
TLVEPDEPCD ARVVLSQSAS SCEDFIPIWE DSYQLAIPNG WPLAGKPLVS IEDLDGIPFI
NRTPCDALDR LKQAMAVEGV QFQPRANIRT IEYTWPMVSA GVGAALLPDW QEIKHNDGFV
LRPIANEKLM KRIGLAYNAS RIDEPLIASV ISVCRSTARQ T
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