| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3696 |
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| Symbol | |
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| ID | 5614087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4499913 |
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| End bp | 4500944 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934649 |
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| Product | alpha/beta hydrolase |
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| Protein accession | YP_001475428 |
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| Protein GI | 157376828 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA TAATCAAAAA AGTGCTGTTT TCTGCGCTGC TCTCTGTGGG TATTTACCTT
CTCATTGCGA TGAGTCTTAC CCTGTTTGGT GCACCGTCGT CAGAATCGAG CGAACAGGAC
CCGCCTGGCA AGCAAGGGGA GAAGCGTGCA GGTTCTGCCG GTATCAATTT CAGTGAGATG
TTACTCGACT ACAGTCAGAT GCCGCCACTG CAGAGCTATG GCACAAGAGG GGAAGGACAA
CTTCGATATC GGTATTACTC TTCAGACTCG GATAAGGTGA TAATTTTAAT TCATGGCTCC
GGCTGGCACA GTCAGCAGTT TTATCCGCTG GCCAAATTTA TCAGTGAGCA GGGCTTGGCG
CAGGTCTATA CGCCGGACCT GCGCGGCCAT GGCGTCAATC CGCAGATACG TGGAGATATC
GATTATATCG GCCAATTCGA AGATGACCTT GCCGATCTGA TTTTCGGAAT AAAACAGGAC
TCACCCGAGT CCAGCATCAT CATGGGTGGG CACTCATCGG GAGGAGGCTT AGCAATACGC
TTCGCCGGTG GGCAGTACGG AGAGCAAGCC GATGCTTACC TGCTGCTAGC GCCATTTATT
TTTTATAATG CACCGACGAC AAGGCCGAAT GCGGGTGGCT GGGCAACCCC ATATACGGCC
AGGATTATTG GTTTGAGCAT GCTCAATAAC ATCGGCATCC ATCATTTCGA TAATTTAATC
AGTATCGAGT TTAATATGCC GGCAGCCTTT CGAAACGGCA CCGAAACCTT GGCCTACTCG
TTCCGTCTCA ATACCTCGTT CGCCCCACGG GATTACGAAG CCGATCTTAG TGCGATATCT
CAGCCACTGC TGGTGTTGGC AGGCACCGCC GATGAAACTA TGTTTGCGGA GAAATATCAG
GAACTCATTA CCGAACATGT GATAAATAAT CAGCAGGTTG AGGTGAGGGT ATTAGCCGAT
TTAAGTCATA TGGGGATCGT GGTGAGCCCG GATGTCAGGC CTGTTATAGG AAGCTGGCTG
GAAGGATTGT AG
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| Protein sequence | MNKIIKKVLF SALLSVGIYL LIAMSLTLFG APSSESSEQD PPGKQGEKRA GSAGINFSEM
LLDYSQMPPL QSYGTRGEGQ LRYRYYSSDS DKVIILIHGS GWHSQQFYPL AKFISEQGLA
QVYTPDLRGH GVNPQIRGDI DYIGQFEDDL ADLIFGIKQD SPESSIIMGG HSSGGGLAIR
FAGGQYGEQA DAYLLLAPFI FYNAPTTRPN AGGWATPYTA RIIGLSMLNN IGIHHFDNLI
SIEFNMPAAF RNGTETLAYS FRLNTSFAPR DYEADLSAIS QPLLVLAGTA DETMFAEKYQ
ELITEHVINN QQVEVRVLAD LSHMGIVVSP DVRPVIGSWL EGL
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