| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3644 |
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| Symbol | |
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| ID | 5612765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4438822 |
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| End bp | 4439874 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934597 |
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| Product | putative NADH-dependent flavin oxidoreductase |
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| Protein accession | YP_001475376 |
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| Protein GI | 157376776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.055572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA ACCTATTTCA ACCTTTTGCG CTCAACGAGA CTATCACCCT ACAAAACCGC
ATCCTGATGG CGCCATTGAC TCGTTGTATG GCAGATGAAG AATTAGTGCC GACTCAGGCT
ATGGCTGAAT ATTATACTCG CCGCGCCGAA GCGGGCCTGA TCATCTCTGA AGCCGTGCTT
ATTCGTCCCG ATGGTCAGGG CTATCCCAAT ACCCCAGGTC TGTTTACCCC GGCTCAGATA
GATGGCTGGC GTGTAGTGAC AGATGCCGTA CATAAAGCCG GTGGCAAAAT ATTTGCGCAG
CTATGGCATA CCGGCCGGGT TGCGCACCCT CACTTTTTCG AAAAATCAGG GTCGACTCAG
GTAATAGCCC CCTCCGCCGT TGGCCTGGAG GGAAGTCTCC CCAGAATGCG AGAGTTGAAC
TATCACGTCC CTAAAGCGGT AAGCCATGAT GAGATAGTGC AGTTAGTCGC CGATTACGCA
CAAGCTGCGG CGAACGCGAT AGATGCCGGC TTCGATGGTG TCGAGATCCA CGGCGCTAAT
GGTTATCTTA TCGATCAGTT CCTGCATCAC GACAGTAATC GTCGCACCGA TGAATATGGT
CAAACAGCCG AAAATATGGC CCGCTTCCCC TTGGCCGTTG TGGATGCGAT ATCAGCCCGC
ATCGGCAATG ACAGAACAGG GTTAAGAGTT TCACCGGGAG CCTATGTCAA TATGGCCGGA
GACAGCAGAG ACCGCGCCGT GTTTGATTAC TTACTCGCTG AGCTGGAGCT ACGTGATTTA
GCCTTTTTAC ATATCGGTAT TTTCGATGAT GCCATGGAAT TTGATTATCT GGGCGGCAGC
GCATCGAGTT ACGTACGTAG CATTTATAGT AAAACCCTCG TTGGCGTAGG GAGCTACAGC
GCAGAAATGG GCAGCGCCGC CATAGCCGCA GATAAATTTG ATCTGTTAGC GATCGGCAGA
CCTTTTATCG CTAATCCCGA TTATGTCGCC CGAGTCCGTG AAGGTGATGA ATTGGTAGAA
TATTCAGATG AGATGCTGAC CAGCCTAGTG TAA
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| Protein sequence | MTDNLFQPFA LNETITLQNR ILMAPLTRCM ADEELVPTQA MAEYYTRRAE AGLIISEAVL
IRPDGQGYPN TPGLFTPAQI DGWRVVTDAV HKAGGKIFAQ LWHTGRVAHP HFFEKSGSTQ
VIAPSAVGLE GSLPRMRELN YHVPKAVSHD EIVQLVADYA QAAANAIDAG FDGVEIHGAN
GYLIDQFLHH DSNRRTDEYG QTAENMARFP LAVVDAISAR IGNDRTGLRV SPGAYVNMAG
DSRDRAVFDY LLAELELRDL AFLHIGIFDD AMEFDYLGGS ASSYVRSIYS KTLVGVGSYS
AEMGSAAIAA DKFDLLAIGR PFIANPDYVA RVREGDELVE YSDEMLTSLV
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