| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3639 |
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| Symbol | |
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| ID | 5612649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4434162 |
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| End bp | 4435448 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640934592 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001475371 |
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| Protein GI | 157376771 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00134622 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACAAA CCTCAGTTAC AATACTGCGT GGGGCCGATA CCATAGGTGG TGGCTGCATA
AAAATCAACC ATAGAGAAGA CAGCATTGTA TTGGATTATG GTGCTCCACT CATGGATAAC
ACAGGTAGAA CACTCGATGC TGATTTAGTT GCAAATCCAT CTATCGAGAA TGGCATTTTA
CTGGATATTC AACAGCAAGA TACTAAGCCT CCTTTAGCTT ATCTACTATC CCACGCACAC
CCTGACCATT ATGGTCTGCT TGGTTCATTA CCTAAAAGTT CGATGATATA TCTGTCAGAT
AGTAGTTACT CCATGATGAC TATTGGCAAT TTATTTTACC CTGAACCACT ACGTTTCGAT
TCGCTTGAGC AATGTCGGCA GTTTTCACCC GGTAAACCGT TTCAGATAGG TCCATTTACG
GTTAAGGCTT TTTTGATGGA CCATTCAGCT TTTGGCGCCT GCAGCTTATT GGTTGAAGTT
GATGGTAAGC AGGTATTTTA CACGGGAGAT TTTCGTGGTC ATGGGCGAAA ATCTCGGGTG
AGTGATTATA TCTACGCCAA TGTTAAGCAG CCTGATCTGA TGCTGATTGA GGGAACAACC
CTTGATGGTG GGCACTCACA GCAGTTTCCT ACCGAAGCCT CGGTTGAAGA GGCAATGGTT
GCTGCCTTTA GTGAGCGAGA CCAGCCGGCT TTTGTCACAG CCTCGGGTAG TAATATTGAC
AGAATTGTAA GCCTGTATAA CGCGACCAAA CGCACAGGAA AAAAGTTGGT TATCGATTTG
TACCAACTTT ACTTGCTAGA GTCGTTAAAG AAATACTCAC CAGGTTTACC ACCACATAAA
AACGACCATA TAAAAGTGAT ATTTCCCCAA TCCCAATTAG CCATCATTAA AGCAGAATTC
GGAGACGATT TCCTACGGCA TAGCCATCGT CATGTAAACC TTAATAAGCT TAAAGATGCT
AACTACGTAT TTCGAATATC TCCCTATGCG ATGGCACCAT ATTTTGACGT ATTTATAGAA
AAGGGGGTAA AGCCCAAACT TATCTATTCC ATGTGGTTAG GTTATCAAAG CAAGCAACCT
AAGTTTGCAG AAATGGCCGA TAAATGTCAG GAATCATGGC AATACGTTCA CACTAGTGGT
CATGCTTATC TGGAGCATTT ACAGAATTTT TCAAGCAAAA TTGCGCCTAA GGTTTTAGTT
CCTGTTCATA CTCTTAACAG TGATAAATTT TTAAATGATT TCGAAAATGT GCGTCTAGTA
AAAAATGGTG AGAAGATAGT TTTATAA
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| Protein sequence | MPQTSVTILR GADTIGGGCI KINHREDSIV LDYGAPLMDN TGRTLDADLV ANPSIENGIL
LDIQQQDTKP PLAYLLSHAH PDHYGLLGSL PKSSMIYLSD SSYSMMTIGN LFYPEPLRFD
SLEQCRQFSP GKPFQIGPFT VKAFLMDHSA FGACSLLVEV DGKQVFYTGD FRGHGRKSRV
SDYIYANVKQ PDLMLIEGTT LDGGHSQQFP TEASVEEAMV AAFSERDQPA FVTASGSNID
RIVSLYNATK RTGKKLVIDL YQLYLLESLK KYSPGLPPHK NDHIKVIFPQ SQLAIIKAEF
GDDFLRHSHR HVNLNKLKDA NYVFRISPYA MAPYFDVFIE KGVKPKLIYS MWLGYQSKQP
KFAEMADKCQ ESWQYVHTSG HAYLEHLQNF SSKIAPKVLV PVHTLNSDKF LNDFENVRLV
KNGEKIVL
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