| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3637 |
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| Symbol | |
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| ID | 5612647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4429845 |
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| End bp | 4431263 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640934590 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475369 |
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| Protein GI | 157376769 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000381817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTACT TCAATCAACT CCTCATAACC CTATCATTAG GGCTTGCCAT ACTCTCTTCC
GCCCAAGCCT TGGCCGCGAA TAAGGCCCCG GAAATAGCAT CGAAAGGTCA GGCCATAGCT
GAGCAGAAAC AGGCAATGAA AAACTTGCAT GGACAACTCA ACGCATCCCT CCGTGCAGCA
GAGCGACACA CAGTCGAACT GACCACCAGT GAACTCAGCA CCTTAACCGC ACCAGGGGTG
GATCCCACCG GTCGTTACCG GGTCGGAGTA CATCGCGCCG TCGGAAAATC GGTTTCACAC
GATAATGCCG ATCTGATTAT TAATATTCCC GGCGCCTATG CTGTTCGACT GGAGCTGGCC
CATGTGAAGG GTGTGGTTTC TGTGTTCAAC GAGTCAGGCC AGGCTCGCCA GTACACAGAA
GATGGCTTCA CCCATACCTT TATCGGTGAA GAAGTGACAG TTCGTGGCGC GGCTCATATA
GAGGGCGCGG GTGCCGTCAA TCTCGCAGGG AACCTGTGTA ACTTCAATGC CTCCTGTGTT
GAGAATGCAC AATGCACCAG CATTCCGAAC GATATAAATG CCGTGCGTAA CGCCTACGCC
AGCATACTAT TCAGATCCGG TGGTTTCTAT TATGTCTGCT CAGGAGGCCT TGTCGCCGAC
AGCGACAGCA ATAGTGAAGT TCCCTACTTT CTGACGGCCA GGCATTGCGT CAGTAAGGGC
CGGGAAGCCA GAACTGTCGA AACCTTCTTC CAGTATGTCC AAAGCAGCTG TTCCGAGCAG
CAAAATTGTT CTCTCCCCGA CTCCAACACA GTTGGCTCAA CCATAGTCAA GAGCGGCAGA
AAAGGTGACT ACTCCCTGCT CCGACTCTCG GATCCCCCCC CCTCCGATTC TGTATATCTG
GGCTGGAACT CAGACCCCAT AGCATCCACC GATGCAGCCG AACTGTTTCG AATAAGCCAT
CCGGGCGGTG CTCCTCAGGC ATACTCAAAA CATGAGGTGG ATATTGATGC ACCAAACTGT
AGCTCCTGGC CACGGGGAAA CTGGATCTAT AGCCGCGATC TATTGGGTGC TACCGAAGGT
GGCAGCAGCG GCTCACCGGT ATTAAACGGT GATGCCGAGA TAGTGGGCCA ACTCAGCGGC
GGCTGTGGCT TCAATGTAGG AGACGTATGT GACTATGGTA ATAACGCCAC AGTCGATGGT
GCCTTCGCCG CATATTACTC AGATATTTCA CAGTTCCTCG GAGGCGGCGA CCCTGACCCC
GGTGGTGATT GTACCGATGC CGACGGAGAT GGCTGGTGCG TCGAAGAGGG AGATTGTGAT
GACGCTGATC CTCAAGTGAA CCCCGGCAGG AATGATCGTG GACGCAAATG GGGGGATGAT
GGAAAAGATA ATGACTGTAA TGGCATTATC GACGGTTAA
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| Protein sequence | MKYFNQLLIT LSLGLAILSS AQALAANKAP EIASKGQAIA EQKQAMKNLH GQLNASLRAA
ERHTVELTTS ELSTLTAPGV DPTGRYRVGV HRAVGKSVSH DNADLIINIP GAYAVRLELA
HVKGVVSVFN ESGQARQYTE DGFTHTFIGE EVTVRGAAHI EGAGAVNLAG NLCNFNASCV
ENAQCTSIPN DINAVRNAYA SILFRSGGFY YVCSGGLVAD SDSNSEVPYF LTARHCVSKG
REARTVETFF QYVQSSCSEQ QNCSLPDSNT VGSTIVKSGR KGDYSLLRLS DPPPSDSVYL
GWNSDPIAST DAAELFRISH PGGAPQAYSK HEVDIDAPNC SSWPRGNWIY SRDLLGATEG
GSSGSPVLNG DAEIVGQLSG GCGFNVGDVC DYGNNATVDG AFAAYYSDIS QFLGGGDPDP
GGDCTDADGD GWCVEEGDCD DADPQVNPGR NDRGRKWGDD GKDNDCNGII DG
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