| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3630 |
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| Symbol | |
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| ID | 5612405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4419580 |
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| End bp | 4420134 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934583 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001475362 |
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| Protein GI | 157376762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00254639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00108702 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAAAAC TTTCTGTCGC GGCAGTATCA TTATTAGCTA TTTTTGCATC AACTAATGCG
TTGGCGGCCA ACGACCACAC AGGTTTCTAT GTCGGTGGCA GTTTAGGTCA ACTTAAACTG
AAAGCCGGTG ATAGTGAGTC GGGTGTAGGC ATTGGGGCAT ACGGCGGTTA TAACTTTAAC
GAGTGGTTTG GTTTAGAGGC CAACATGTTT GTCTCTGGCG ATCTGGGTGA CAGTCGTACT
GACCTAGGCG CCGGCACCTT CGCTTTTACC CCTAAGTTTA CCTATCAGAT CGATGATACA
TTTTCCGTAT ATGGCAAAGT TGGTATTGCC TCTATGGCTG TTGTTGCCAG ACCCGATTAC
TTACGAAATG AAGATTTCAC TGGCTTCGGT TGGGCCTATG GCGTAGGAGT AAATGCCTCA
ATGACAGAGA ATCTGAATAT TCGCCTTGGT TATGATGTTG TCACCGGTGA GCTGGATTCT
GAGTATTCTA ACGGCGCTCA AAACATAGAT ACCGATATCT CTAACTTCGC GTTAGGCATA
CATTACCAGT TCTAA
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| Protein sequence | MKKLSVAAVS LLAIFASTNA LAANDHTGFY VGGSLGQLKL KAGDSESGVG IGAYGGYNFN
EWFGLEANMF VSGDLGDSRT DLGAGTFAFT PKFTYQIDDT FSVYGKVGIA SMAVVARPDY
LRNEDFTGFG WAYGVGVNAS MTENLNIRLG YDVVTGELDS EYSNGAQNID TDISNFALGI
HYQF
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