| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3621 |
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| Symbol | |
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| ID | 5612320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4408986 |
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| End bp | 4410809 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934574 |
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| Product | putative adenylate/guanylate cyclase |
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| Protein accession | YP_001475353 |
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| Protein GI | 157376753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCA GTCACTTTCT CAACGCATTC AGCTTAGGCT TCCTGTTATT GGTCCTCACC
GAGGTGATCT GGTTTAAGAC ACTGGTGCCT CTGGAGTTTG GTCTTTCCGA TTATTTCGTC
AAGATACACG CGCAAAGCGT GCAGCCGGAT CCGGATATCG TGATTGTAAA TATCGATGAT
GCCAGCCTGG CCCGCATGGA GAATCAGGTA GGCAGCTGGT TCTGGCCTCG CTCGGTTCAT
GGTGAAATGG TCGAAGGGAT AAGCAAGCAG CAACCCAAAG CCATAGTGTT CGATCTCTCT
TTCGTCGAGC GGGATCTCTA TCGAACAGAG AGTGACGCCC TGTTCAATCA AGCTCTCGAA
GGGAAGCAGA ATATTTTTTT CGCCCTGGTG CGGCTTGACT CACAGCAAGA TAAGAATGGA
CCAGAGCTCG CTGTTATTGC TGATAAGGTT GGCTTAATCA GAACCGAAGA AGCAAAACCG
GATGCCAGAG CCGCGCTTAT GCCCCCACTG GCAATAGACC CGAAATACTG GCGTTTAGGC
ACAGTGAACT TTCTTAATGA CAGTGACGGC GTCGGGCGCA GATATGATAT CTACAGGAAT
ATTTACGGCT GGCTACTGCC CTCGCTTCCA GCCAGAGTCA TCAAGGATCT CGGCTATGAG
CTTCCCATGG TCGAGCATAT TACGCTCTCA TGGCGTGGCC CAAAAAATCC CTATCGAAGG
CTCTCCTATG CCGATCTCTA TGAAGACTTT AACCGGGAGA TCCCCCTCAG AGAACCCAAG
GAGTTAGCGG GTAAAATTGT CATCATTGGC GCCGATGCCT CGGCGCTACA TGATGTTAGA
GTTACGCCAA TCGATAGTCT CTATTCCGGC CTGGACATTC TCGCTACCGC CATAGATAAC
CTGAAGAACC AAAGCTATAT GACAACGCTT CCCCAATGGA GTTACTTGCT GATATGTTTG
GCCGCAATTA TAGGCGTTTA TGTTTGCTTC ATGTTCAGGA TCAACGCTAT TTTCGTGGGA
CTCTCACTCC TGGGTGCAAG CGGTATAGCC CTGCTCGCCA GCTACCTGTT ATTGAACCGG
CAGATCTTAC TTCATATGCT AACGCCACTC TTATTGATGT GGCTGTATTA CTTTTCTCTA
TCGCTGCGGG AGTACCTTGT CGAGCTAAGG GCAAGGAAAA AAACGGTCGA GCTCTTCAGC
CGATTCGTCG ACCCGGTTGT GGTGAAACAG CTGGTCTCAA GCGAAGGGTT GAGTCGTGAG
GGAGAGAGCA GACAGGTCTC TGTACTATTT TCAGATATTC GCGGCTTCAC CAGTCTCTCT
GAAAACCGTA CACCACAGGA GGTAGTGAGC CTGTTAAACC GTTACTTTAC CCTGCAGGTG
GCCGTTGTAT TTAAGCATGG AGGCTCACTG GATAAGTTTA TCGGTGACTG CATCATGGCC
TTCTGGGGCG CCCCCCTGGA CGACCCACAG CACGCCGTCC ACGCCGTCAA TGCCGCAATG
GAGATGGCGG AGGTATTGCA ACAATTCAAG GAGGAGCTGG GGGAACAAGA TGCCAACTTT
GATGTTGGCA TCGGCATCCA CTCGGGCCCA GCCGTGATAG GCCTTATCGG CTCGGAGCAA
CGTAAGGAAT ATACCGCCAT CGGAGACACG GTAAACTTAG CCAGCAGAAT CGAGGGGCTG
ACTAAGGGGG TCTCCCGAAT TTTAGTCTCC GGTGACACCA TGGTTCTGTG CGCTGACCAC
TTTGACTTCA AGCCCTACGG CTTCTATAAG GTTAAGGGCC GGGCACAAGA AGTTGAACTT
TTCGCACCGG TAAGGAAAAC ATGA
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| Protein sequence | MKSSHFLNAF SLGFLLLVLT EVIWFKTLVP LEFGLSDYFV KIHAQSVQPD PDIVIVNIDD
ASLARMENQV GSWFWPRSVH GEMVEGISKQ QPKAIVFDLS FVERDLYRTE SDALFNQALE
GKQNIFFALV RLDSQQDKNG PELAVIADKV GLIRTEEAKP DARAALMPPL AIDPKYWRLG
TVNFLNDSDG VGRRYDIYRN IYGWLLPSLP ARVIKDLGYE LPMVEHITLS WRGPKNPYRR
LSYADLYEDF NREIPLREPK ELAGKIVIIG ADASALHDVR VTPIDSLYSG LDILATAIDN
LKNQSYMTTL PQWSYLLICL AAIIGVYVCF MFRINAIFVG LSLLGASGIA LLASYLLLNR
QILLHMLTPL LLMWLYYFSL SLREYLVELR ARKKTVELFS RFVDPVVVKQ LVSSEGLSRE
GESRQVSVLF SDIRGFTSLS ENRTPQEVVS LLNRYFTLQV AVVFKHGGSL DKFIGDCIMA
FWGAPLDDPQ HAVHAVNAAM EMAEVLQQFK EELGEQDANF DVGIGIHSGP AVIGLIGSEQ
RKEYTAIGDT VNLASRIEGL TKGVSRILVS GDTMVLCADH FDFKPYGFYK VKGRAQEVEL
FAPVRKT
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