Gene Ssed_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3619 
Symbol 
ID5611829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4406605 
End bp4407138 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID640934572 
ProductFMN reductase, NADPH-dependent 
Protein accessionYP_001475351 
Protein GI157376751 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA TTGCTTTTGC CGCAACGAAT CACAAGAAAT CAATTAATAA ACAGTTAGTA 
GAATATGCTA CGACTCTCTT AACTAAGGTA GAGGTTGAAG TATTAGACTT AAACAACTAC
GAACTGCCCC TCTATGGACA AGACAGAGAG GAAGAGTTGG GGCACCCCCA GCTTGCTAAA
GATTTCTTGG CTAAAATAGG TGAAAGTGAT GGGATCATCA TCGCCTTCGC CGAGCACAAT
GGTTCTTATA CCGTGGCGTA TAAAAATCTG TTCGATTGGT GTTCCCGTAT CGAGCCAAAA
GTTTATCAAA AGAAGCCTAT GGTGCTACTG GCTACATCGC CTGGTTCTAT GGGGGCTTCC
AATGTATTAG CCACAGCGAT TCAATCGGCG CCATATTTCG ATGGTGTTGT GAAGGCCAGC
CTGTCTATTC CCAGCTTTTT TGATAATTTT GATAGCGAAA AAAAGGAACT AAAGCATGAA
GAGTTAGATG AACAGCTCAG GGATGCGATC AGTCACTTAA ACCATTTAAA GTAA
 
Protein sequence
MKVIAFAATN HKKSINKQLV EYATTLLTKV EVEVLDLNNY ELPLYGQDRE EELGHPQLAK 
DFLAKIGESD GIIIAFAEHN GSYTVAYKNL FDWCSRIEPK VYQKKPMVLL ATSPGSMGAS
NVLATAIQSA PYFDGVVKAS LSIPSFFDNF DSEKKELKHE ELDEQLRDAI SHLNHLK