Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3619 |
Symbol | |
ID | 5611829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4406605 |
End bp | 4407138 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640934572 |
Product | FMN reductase, NADPH-dependent |
Protein accession | YP_001475351 |
Protein GI | 157376751 |
COG category | [R] General function prediction only |
COG ID | [COG0431] Predicted flavoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA TTGCTTTTGC CGCAACGAAT CACAAGAAAT CAATTAATAA ACAGTTAGTA GAATATGCTA CGACTCTCTT AACTAAGGTA GAGGTTGAAG TATTAGACTT AAACAACTAC GAACTGCCCC TCTATGGACA AGACAGAGAG GAAGAGTTGG GGCACCCCCA GCTTGCTAAA GATTTCTTGG CTAAAATAGG TGAAAGTGAT GGGATCATCA TCGCCTTCGC CGAGCACAAT GGTTCTTATA CCGTGGCGTA TAAAAATCTG TTCGATTGGT GTTCCCGTAT CGAGCCAAAA GTTTATCAAA AGAAGCCTAT GGTGCTACTG GCTACATCGC CTGGTTCTAT GGGGGCTTCC AATGTATTAG CCACAGCGAT TCAATCGGCG CCATATTTCG ATGGTGTTGT GAAGGCCAGC CTGTCTATTC CCAGCTTTTT TGATAATTTT GATAGCGAAA AAAAGGAACT AAAGCATGAA GAGTTAGATG AACAGCTCAG GGATGCGATC AGTCACTTAA ACCATTTAAA GTAA
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Protein sequence | MKVIAFAATN HKKSINKQLV EYATTLLTKV EVEVLDLNNY ELPLYGQDRE EELGHPQLAK DFLAKIGESD GIIIAFAEHN GSYTVAYKNL FDWCSRIEPK VYQKKPMVLL ATSPGSMGAS NVLATAIQSA PYFDGVVKAS LSIPSFFDNF DSEKKELKHE ELDEQLRDAI SHLNHLK
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