| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3610 |
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| Symbol | |
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| ID | 5611572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4397250 |
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| End bp | 4398149 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934563 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475342 |
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| Protein GI | 157376742 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGT TGAAGAGCAT GCAGGTGTTT GTCAATGTGG TACAACATGG CAGTTTTTCT
CGCGCCGCGA TCAATTTTGC AGTCACTTCA ACCATGGTTG GTAAACACAT TAAGTTCTTA
GAGACGCACC TTGGGACTAA GCTGTTAAAT CGCACCACAC GTAAACAGTC ATTAACGGAA
GCCGGACAGC TCTATTATTT AGAGTGCCAG CGAATTCTGG ATGATATTGC GGAAGCTGAA
AATAGCCTGC AAGCATTAGA AAATAAACCC AAAGGAAGGA TACGCATCAA TTCCCCGGTC
ACCTTCGGCA ATATTCTACT CGCCCCAATA GTGGCAGATT TTCTACAACG CTATCCCGAT
ATTAATGTTG AACTGACACT CGATAACGAT TTGATCGATC CTCTTCACGA CCCGGTAGAT
GTGGTGATCC GCATCGGTGA ACTCGCCAAC TCCTCGTTAA TCGCTCGCCA GATTGCCGTT
TATGAAATGA TGTTTTGTGC CTCTCCCGAT TATCTTGCCC GTCATCGAGT CCCTCTTTCT
CTGAATGACT TAGCGTCGCA TCAATGTCTG GGATTCAGTT ACGGAGATAT TCAATCGAGT
CTGGCGCTGC GTATCGATAC TTCAGCATTT GATACACAGC ATTCTCGGTT AACTTCGAAC
AGTGGTCAGG CTCTGAAAGT CGCGGCGTTG AAAGGTACAG GGATTTTACT GCAACCACGT
TTACTACTCT CCGAAGAGTT AGGCCGTGGA GACTTGATAG AAATATTGAG CGAACAAGTC
CCCAGCCCGA CACCGATACA CCTCATGTAT AAGAGCAAGG CGCTGCCACT GAAAACACGG
GTTTTCATTG AATTTGTGTT GACCGCGATG AACGCCAATC TCAAAAGGGA TAGGCCGTAA
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| Protein sequence | MDKLKSMQVF VNVVQHGSFS RAAINFAVTS TMVGKHIKFL ETHLGTKLLN RTTRKQSLTE
AGQLYYLECQ RILDDIAEAE NSLQALENKP KGRIRINSPV TFGNILLAPI VADFLQRYPD
INVELTLDND LIDPLHDPVD VVIRIGELAN SSLIARQIAV YEMMFCASPD YLARHRVPLS
LNDLASHQCL GFSYGDIQSS LALRIDTSAF DTQHSRLTSN SGQALKVAAL KGTGILLQPR
LLLSEELGRG DLIEILSEQV PSPTPIHLMY KSKALPLKTR VFIEFVLTAM NANLKRDRP
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