Gene Ssed_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3609 
Symbol 
ID5611571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4396846 
End bp4397148 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content44% 
IMG OID640934562 
Producthypothetical protein 
Protein accessionYP_001475341 
Protein GI157376741 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC AAGGCTTGTT TATTACAGCG GAACTACAGG TTAAGCCTGA TATCGATCTC 
GACACGGCCA TTGCGGCTAT ACATTCCTTT TGTGAGGGGA TGAATAGTGA AAAGGGGTGT
TCGATGGCAC TTCCCCTGCA AGACAGAGAA AATCCTCGCC GCTTCATTTT CTGGGAACGT
TATGAAGATA AAGCCGCCTT CGAACATCAT TTTCAGGCCG AACATACGCA AAAATTTATC
CAATCCGGTT TAACTGAGTT GGTGCAGGCA TTCGAAACTC AACTGTTAAC AGAGCAGAAG
TAA
 
Protein sequence
MFEQGLFITA ELQVKPDIDL DTAIAAIHSF CEGMNSEKGC SMALPLQDRE NPRRFIFWER 
YEDKAAFEHH FQAEHTQKFI QSGLTELVQA FETQLLTEQK