Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3609 |
Symbol | |
ID | 5611571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4396846 |
End bp | 4397148 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640934562 |
Product | hypothetical protein |
Protein accession | YP_001475341 |
Protein GI | 157376741 |
COG category | [S] Function unknown |
COG ID | [COG1359] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAC AAGGCTTGTT TATTACAGCG GAACTACAGG TTAAGCCTGA TATCGATCTC GACACGGCCA TTGCGGCTAT ACATTCCTTT TGTGAGGGGA TGAATAGTGA AAAGGGGTGT TCGATGGCAC TTCCCCTGCA AGACAGAGAA AATCCTCGCC GCTTCATTTT CTGGGAACGT TATGAAGATA AAGCCGCCTT CGAACATCAT TTTCAGGCCG AACATACGCA AAAATTTATC CAATCCGGTT TAACTGAGTT GGTGCAGGCA TTCGAAACTC AACTGTTAAC AGAGCAGAAG TAA
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Protein sequence | MFEQGLFITA ELQVKPDIDL DTAIAAIHSF CEGMNSEKGC SMALPLQDRE NPRRFIFWER YEDKAAFEHH FQAEHTQKFI QSGLTELVQA FETQLLTEQK
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