| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3603 |
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| Symbol | |
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| ID | 5613915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4390688 |
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| End bp | 4391614 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934556 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475335 |
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| Protein GI | 157376735 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA AACATGTTGC CGTCATAGGT GCTGCAGGCC AAGTTGGTAC GCCACTGACT
AAAGGCTTAC TCTCACTAGG GCACCAAGTT ACCATCATAT TTCGAGCTCA CAACGCACAA
AATGATGCCA AGTTAACAGA GTTCGAAACT CTGGGCGCGA CACTCGTCGA GTGTCCGGAT
ATGAAAAATG TCAATGCACT GGCAAAGGCA CTGAGAGGTG TGGATACCTT TGTCGCCAGC
GTGCCCGGCT CGAAGGAGAT CATTCGGGAG TTTGAACCTC TCTGGCTTGA GGCAGCGGTA
AAAGCCGGCG TGAAACGATT TGTTCCTACC GAGTTTGGCG CTCATACCCA GGCGCTGGAG
ATGGGAGATG GTGAGATCTT CGATCAGAAG AAGCGTTTTC ACGATCAATT GATGAACTCA
AGCTTAGACT GGACCCTTTT TTACAATGGC GGCATCTTCG ATTACTTTCT GCCAAATTTA
AGGTTCTTCA GCAAGATAAC CACATTCGGA GACCTGAATA TTCCTATCTA CACGCACGAT
ATCGAAGATA TTGGGTACCT CGCCGCCATG GCCGTGACCG ACGACCGTAC CGTAAACAGA
TGTGTTCAGC TCGACTATAA TGCATTGACT CAAAACGAGA TGTTAACCCA GATCAAACAA
AACTGGCCAG ACACTCCGTT TGAATATGAG CACTTCTCCA CTGAGTACAT CATCGAGCAG
AAAGAGAGCT CGGGTGACGA GATAACGGCT AAGAAAGGAT CCGAAACCGA TAAGGAGCGT
TGGGGGATCA ACTATGTCAT CTATGTCATC GATAAGCTTG CCGCATTCAC AGACCAGACT
CTACGTGCCA GTGAGATCTA TCCAGACTAC GTATGTAAAC GTCCGCAAGA TGCGTTAAAG
GATGAAAAAT TTATCTTCGA AGGTTAA
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| Protein sequence | MNKKHVAVIG AAGQVGTPLT KGLLSLGHQV TIIFRAHNAQ NDAKLTEFET LGATLVECPD
MKNVNALAKA LRGVDTFVAS VPGSKEIIRE FEPLWLEAAV KAGVKRFVPT EFGAHTQALE
MGDGEIFDQK KRFHDQLMNS SLDWTLFYNG GIFDYFLPNL RFFSKITTFG DLNIPIYTHD
IEDIGYLAAM AVTDDRTVNR CVQLDYNALT QNEMLTQIKQ NWPDTPFEYE HFSTEYIIEQ
KESSGDEITA KKGSETDKER WGINYVIYVI DKLAAFTDQT LRASEIYPDY VCKRPQDALK
DEKFIFEG
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