| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3599 |
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| Symbol | |
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| ID | 5610991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4387239 |
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| End bp | 4388621 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934552 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475331 |
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| Protein GI | 157376731 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.792051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATT GCGCTATCTC TTACTACAGA TCTATCTCCC TGGCGGTTGC TCTGGTGGCT
TCAAGCGGTC TTGGTCTTGC ACATGCAGCT GAGCAGAGCG ATGAAACTAC CGAGATTTAT
CGGCCAGCAA TCACCAACAG CAGCTGGGAA GATACAATCA GAGCTCCCTC GGTATACGAT
CAGCCTTTTA AGGTCTCTCT GTTCAGTGCG ATACACGGGG AAGACAGTGC ACGACTGTGG
TCTCAAACAA AATCCGTAGC TGCTTACGGC GTGGGCTTCG CCGGTTTTCT TGCCCTGCTC
CCCTCCTCTA TCACCAACTG GGATAAGAGT GGTGAGAAGT TACACAAAAA ATGGTGGGAC
AATGTAAGCA GCGGCCCGGT ATGGGACAGA GACAATTTTG CCATCAACTA CATAGGTCAT
CCCTACTTTG GCGGCGTCTA TTACCAGGCC GCAAGAAAAT CAGGTTATCG CCAGTGGGAT
GCCTTTATGT ACTCCTTTAT GATGTCGACC TTTTATTGGG AGTATGGTGT CGAAGCCTTT
GCCGAAGTGC CATCGATTCA GGATCTGGTC GTGACCCCGG TACTTGGCTG GGTTTATGGA
GAATGGGCCT TCAATAAGGA GCGGGAGATC CGCCAACGCG GAGGAACAGT ATGGGGATCT
GAGGGGTGGG GAGATACGGC ACTGTTTTTC TTAGACCCAA TCGACTCACT GGGACGAGGA
GTCAACACCC TGTTTGGTGA CGATGTTGTC AAAGCCGGTA CAGGTTATCT CTCAATGACA
GAGGTACCTC TGGATAATGG CCGCATCGAT AAACAGGTGC AATTTCAGGT GCAATACGCC
ATAGGTGCGG GTAAAGCCAA CGAAAGCGTC AGTCGTCACC AGAGCGCTAA CAACAAGGCC
GGCTCAGTCG AAGACCCGGT CGATTTTGGC ATTGTAGGAA TATCTATTGG CAGCAGTTAT
ATGTCACCGG GAGAGGTGTG GAACCTTGAG AGTGGCTGGG CACCCAGTGC CAGCGTGGGG
CTCTATTTTA CCCGCAGTTT TTCGACCAGG TTAAGCTACG CCCGCGGAAA GCTAACCGAC
AAGCGAACGG GACAAAGCAC CACTTTCGAA AACTACAGCT TTGACGGCCA GTACTACTTC
AACGGCCAAA ATACACTGAG ACCCTACCTG ACACTCGGTA TAGGCGAATC ATTGATAGAG
TTAGATAAGG AGAAGAAAGC CTTTCAGGTC AACGGGGGTG CGGGCCTGCA CTACCGCCTG
TCTCCCAACT GGGCACTGCA ACTGGACTGG CGTCATTTCT ATAGCGCTAA ATTATCCAGT
TGGGACAACC TGACCGTAGG ACAGCTGGTC TATCGATTCG GTCAGGGAGA AAGCTGGTTA
TGA
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| Protein sequence | MKYCAISYYR SISLAVALVA SSGLGLAHAA EQSDETTEIY RPAITNSSWE DTIRAPSVYD
QPFKVSLFSA IHGEDSARLW SQTKSVAAYG VGFAGFLALL PSSITNWDKS GEKLHKKWWD
NVSSGPVWDR DNFAINYIGH PYFGGVYYQA ARKSGYRQWD AFMYSFMMST FYWEYGVEAF
AEVPSIQDLV VTPVLGWVYG EWAFNKEREI RQRGGTVWGS EGWGDTALFF LDPIDSLGRG
VNTLFGDDVV KAGTGYLSMT EVPLDNGRID KQVQFQVQYA IGAGKANESV SRHQSANNKA
GSVEDPVDFG IVGISIGSSY MSPGEVWNLE SGWAPSASVG LYFTRSFSTR LSYARGKLTD
KRTGQSTTFE NYSFDGQYYF NGQNTLRPYL TLGIGESLIE LDKEKKAFQV NGGAGLHYRL
SPNWALQLDW RHFYSAKLSS WDNLTVGQLV YRFGQGESWL
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