| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3584 |
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| Symbol | |
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| ID | 5614011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4368916 |
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| End bp | 4369881 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640934537 |
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| Product | ABC sugar transporter inner membrane translocator |
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| Protein accession | YP_001475316 |
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| Protein GI | 157376716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAGA ATCTGATTTT AATCTTAGAT GCGACCCTAA GGGTGTCGGC GCCGCTTATT
CTTGCTGCGC TGGCCGGCTT GTTCTCGGAG CGTTCGGGCA TTGTGAACAT CGCCCTGGAA
GGTAAGATGC TGTCGGCGGC GTTTGCCGCA GCAGCTACCG CTTCTGTTAC CGGCAATGTT
TGGCTGGGCT TGCTTGCCGC CATCGGCGTT TCTGTTTGTC TGTCGTTGAT CCATGGTTTT
GCCTCTATCA CACACAGAGG CGATCAGATC GTCTCGGGTG TGGCGATTAA TATGTTGGCT
GTGGGTCTGA CTGTGACGCT GGGACGTTTC TGGTTTGGAT TGGGCGGTCA GACACCTGCT
CTTCCTGACA GTGCGCGTTT TACACCGATT ACGCTGCCTG GCGCCGATGC CGTTGCGGAT
GTACCTGTGA TTGGTCCGCT CTATAGTGAA CTTATTTCCG GACATAATAT TCTGGTCTAT
CTCGCGTTGC TTATGGTGCC TTTTGTTTGG TGGGTAGTAT TTAGAACCCG TTTCGGATTG
CGTCTTCGTG CGGCGGGTGA AAACCCACAT GCCGTCGATA CCGCGGGTAT CTCCGTTGCC
TGGATCCGTT ATCGCGCTCT TATCTGTGCA GGTATATTGT GCGGTATTGC AGGTGCTTAT
CTGTCTACCG CACACAGCGC CGGCTTCGTG GCGAATATGA GTGCCGGTAA GGGCTTTATC
GCCTTGGCTG CATTGATTTT CGGTAAGTGG AAGCCAGTGC CTGTGTTGTT TGGTTGTCTG
TTGTTTGGTT TCCTCGATGC GGTGGCTATT CGTCTGCAGG GCGCCGAGTT GCCGATAGTC
GGTGAAATTC CGGTACAGGC GATCGAAGTC TTACCTTACA TCCTGACCGT ACTCCTGCTG
GCAGGCTTTA TCGGCCGCGC CGTCGGACCT AAGTCAATCG GTGTACCGTA TGTGAAGACT
CGTTAA
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| Protein sequence | MYENLILILD ATLRVSAPLI LAALAGLFSE RSGIVNIALE GKMLSAAFAA AATASVTGNV
WLGLLAAIGV SVCLSLIHGF ASITHRGDQI VSGVAINMLA VGLTVTLGRF WFGLGGQTPA
LPDSARFTPI TLPGADAVAD VPVIGPLYSE LISGHNILVY LALLMVPFVW WVVFRTRFGL
RLRAAGENPH AVDTAGISVA WIRYRALICA GILCGIAGAY LSTAHSAGFV ANMSAGKGFI
ALAALIFGKW KPVPVLFGCL LFGFLDAVAI RLQGAELPIV GEIPVQAIEV LPYILTVLLL
AGFIGRAVGP KSIGVPYVKT R
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