| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3576 |
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| Symbol | |
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| ID | 5613574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4358395 |
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| End bp | 4359324 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934529 |
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| Product | carbonate dehydratase |
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| Protein accession | YP_001475308 |
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| Protein GI | 157376708 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCA ATAAGCTGTT CGATGGCATC GTAATATTTA CTCAGGTGGT TAAATCCGGT
GGATTTTCTG CGGCCGCCGA GTCCATGGGA CACTCGAGCT CCTATGTGAG CAAAGAGATC
AATAAGCTGG AGGCTCGTCT TGGAGTGCGC CTGCTTAACA GAACCACACG CTCTATCGGC
CTCACGCCCG AAGGCGAAGC CTATTATCAG CAGTGCCAAC AGCTGATGGT AGATGCAGAG
CAAGCGGTGG AGCTTATCAC CCAACATGAT GTCGACCCCA AGGGCAGACT CAAGATCAGC
AGTCCCATTG GGTTTGCCAA CAGCTATCTG CAGCCAATCC TGTCTGAATA TATGCAGCGT
TACCCTAACG TGAGTTTAGA ACTGGATCTC AACGACAGAC GAGTCGATGT GGTGGCTGAA
GGGTATGATT TGGCGATAAG GGCCGCACTT CAATTAGAGG AGTCCAGCCT GATCTGTCGC
AAAATATTTA GCTGTAAAGG GTATACCGTA GCCAGTAAAG CGTACATATC CAGACATGGG
CGTCCCCACC ATCCTCAGGA GCTAAGCCGC CATCACTGCC TATGCTATTC CAACCACAAG
ACGCCGGGTC GCTGGCAGTA TAAGGACAGC GAGGGAGATC CGATACAGGT CGATGTTAGG
CAAAAAGTGC TCAGTAATAA TGCAGAAATA CAGCTGGCAC TAACACTAAG CGGGCATGGG
ATCTGCCGCT TACCTAAGTT CTATATGACC GATGCCTTAG CGTCAGGGCA ACTCGAGATC
CTGTTTCCCG CTCTGCCCGC TCCGGAAATC GATGTCTATG TGGTCTATCC GAGCCGCAAG
CACCTGTCCC CTAAGGTGAG GGCCTTTATC GACTTAGTCG TGGAAAAAAT TCCGCCGACC
GTGCTCGCCG AAGACGCTTC AGAGAAATAA
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| Protein sequence | MTSNKLFDGI VIFTQVVKSG GFSAAAESMG HSSSYVSKEI NKLEARLGVR LLNRTTRSIG
LTPEGEAYYQ QCQQLMVDAE QAVELITQHD VDPKGRLKIS SPIGFANSYL QPILSEYMQR
YPNVSLELDL NDRRVDVVAE GYDLAIRAAL QLEESSLICR KIFSCKGYTV ASKAYISRHG
RPHHPQELSR HHCLCYSNHK TPGRWQYKDS EGDPIQVDVR QKVLSNNAEI QLALTLSGHG
ICRLPKFYMT DALASGQLEI LFPALPAPEI DVYVVYPSRK HLSPKVRAFI DLVVEKIPPT
VLAEDASEK
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