| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3574 |
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| Symbol | |
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| ID | 5611617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4356375 |
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| End bp | 4356908 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934527 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475306 |
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| Protein GI | 157376706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0431] Predicted flavoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAT TAGCCTTTGC AGCCAGCAAC AGTTCAGCAT CTATCAATAA GCAGCTCGCC
ACCTACGCCG CATCACTGGT TGAGGGCGCC GAGATTGAGA TCTTAGATAT TAACGACTAC
GAGATGCCAA TTTTCAGTCA GGACAGAGAG AATGAGTTGG GGCAACCAGA GTTGGCGCAG
CAGTTCTTTG CCAAGATAGG CAGTGTCGAC GGGATCATTA TCTCGTTTGC CGAGCATAAC
GGCTCCTACA CCGCGGCCTA CAAGAATCTG TTTGACTGGA CATCACGTAT CGATATGAAG
GTATTTCAGA ACAAGCCTAT GGTATTGCTT GCCACATCTC CCGGACCGGG TGGTGCCGCC
ACCGTACTGG CAGCCGCTAG CGGCAGTGCG CCTTACTTTG CAGCCGATGT CAAAGCCACT
CTGTCGGTGC CGAGCTTTTA TGATAATTTC GATATCGAAG TGGGTAAGAT GCGTAACGAA
GAGCTGGATC AGCAGCTGAG GGACGCCGTG TTTAAGCTTC AGCCTACTAG CTGA
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| Protein sequence | MKLLAFAASN SSASINKQLA TYAASLVEGA EIEILDINDY EMPIFSQDRE NELGQPELAQ
QFFAKIGSVD GIIISFAEHN GSYTAAYKNL FDWTSRIDMK VFQNKPMVLL ATSPGPGGAA
TVLAAASGSA PYFAADVKAT LSVPSFYDNF DIEVGKMRNE ELDQQLRDAV FKLQPTS
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