| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3568 |
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| Symbol | |
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| ID | 5613382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4348982 |
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| End bp | 4349569 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934521 |
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| Product | acetyltransferase-like protein |
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| Protein accession | YP_001475300 |
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| Protein GI | 157376700 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAACAAC TCATCAGTAA GCAGTCCAGA ATTGAAAGCA TAAAAAACTC CCATGTATTT
ACCACCGAGC GCCTGCTTAT CAGACCGATA GAGCCCCGGG ACAAGTTACT TTTTCGTCAG
TTATATACCG ACAAAAAAAT CATGCGTAAC ATAGCCGAGC CGATGACAAT CGAGCAGGCT
GACCGCGCCT TTGAGACTTC GTTAAGCAAC ACAAAAAAAG TAAACCCCAC ACAGATGAGC
TGGGTGATCA CATCTCGAGA TGATGAACAA GCGATAGGGA TAGAGGGATT GGTCTGGCAT
GGCGAAGACA GGTCTCAGGC AGAGATTGGA ATTATGTTGC TGCGTAAAGC CAATGGAAAG
TTGCTCCCCG AAGAAGCCAT GGGGGCATTG ATGGAATACG CCTATAGCAA ATTAGAGATA
GTTCGTATTA ATGCCCAATT TTCAGGCCGC AATCTGGCTA CTGAGCGCTT CGTAAAAAAG
CTGGGATTCG TCTTCGAAAC ACCATTAATC TCAACCGAAT GTATCGGGAA GCCGAGTAAA
AGTTTCGATA AACACTGCTT CGCCGAAAAG AATCACTACA AGCTCTGA
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| Protein sequence | MEQLISKQSR IESIKNSHVF TTERLLIRPI EPRDKLLFRQ LYTDKKIMRN IAEPMTIEQA
DRAFETSLSN TKKVNPTQMS WVITSRDDEQ AIGIEGLVWH GEDRSQAEIG IMLLRKANGK
LLPEEAMGAL MEYAYSKLEI VRINAQFSGR NLATERFVKK LGFVFETPLI STECIGKPSK
SFDKHCFAEK NHYKL
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