| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3543 |
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| Symbol | |
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| ID | 5611953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4318588 |
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| End bp | 4319319 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934496 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475275 |
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| Protein GI | 157376675 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAACA AGAGTCTGTT AGAGAAAGGT ATCTTAGAAA AGAGTCAGTT AGGAAATAAA
ACTGCTTTAT TTCCTAACGA CAAGGGGCTC ACATCTGCCG GGGCTGCTAA GCGTGAGCAT
GGGTCAATTA AAGCTGAATT TGTGAGCGCC TATAATTCCG GACTCAATCG GCGTGCTTTT
TTAAGGCAGA CCGGAGCCGC GGCCGTGTTG CTCGGCTTGC TTGGGGCTAA ACCCAGTGCC
GTGATAGCAG AAGAAGCAGA GGACAAAGTA GAGAATGACA GGGGATTAGA AGACTTCAAT
GCCCATAGCC GCGGTGTTGT CGAGGCGGTG CAGTTGCAGC TATTTCCCGA TGATGGCGAT
GGCCCTTCGG CCAAGCAGCT TAATGGATTT CAGTACCTGA GTTGGGCATT GGACGATCCT
GAAAATGTAG CCGAGGGTGA TAAGGCGTTT ATTCTCAAAG GCGTAGGCTG GTTAGAGGAA
CAGTCAAAGG CGACTCAGGG CGAGAGCTTT ATAAAATTGT CACTCATTCA ACAAGATACG
GTGATGAAAC AGATTTCACA AACCCGGGCC GGTGAAAACT GGTTATCGTT ACTGCTCTAT
TATCTCCTCG AGTCACTGAC CCTGGATCCT GTCTATGGCG GCAATCCCGA TGGTATTGGC
TGGAAGTGGC TGGAGCACCA GCCTGGTTTT CCTCAGCCCG TTAAGGGAAA AACCTATTTA
GATTTTAGCT AA
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| Protein sequence | MLNKSLLEKG ILEKSQLGNK TALFPNDKGL TSAGAAKREH GSIKAEFVSA YNSGLNRRAF
LRQTGAAAVL LGLLGAKPSA VIAEEAEDKV ENDRGLEDFN AHSRGVVEAV QLQLFPDDGD
GPSAKQLNGF QYLSWALDDP ENVAEGDKAF ILKGVGWLEE QSKATQGESF IKLSLIQQDT
VMKQISQTRA GENWLSLLLY YLLESLTLDP VYGGNPDGIG WKWLEHQPGF PQPVKGKTYL
DFS
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