| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3541 |
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| Symbol | |
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| ID | 5611951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4315709 |
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| End bp | 4316641 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934494 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475273 |
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| Protein GI | 157376673 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTAAAG TAAGCGACAA ACTGCAGCCT TGGCTCGAAA ACTTTAACCA ACAAATTGCC
ATACTCATTG AAAATGGCTT TAAGCCTACC GCAACCAATG CCCGTGAAGG GTTAGCTAAC
TTAACCAAAG GACTAGTCAC TGATATACCG GAGATCGCAT GGGTGGGAGA CGATCTGGTT
ATTAATGATG AATATGATGT TCCGGTACGA ATCTACCATC CTGCACCGGA AAAAGCCTTA
CCGGTTATTG TCTACCTCCA CGGTGGCGGA CACATGGCAG GCAGTGTGAC AGTCTACGAC
CCCATCTGCC GAAAGCTAGC CAATGCGACA CAACATATCG TTGTCTCGGT AGATTATCGC
TTAGCCCCCG AATGCCGTTT CCCGGCAGGG CTTAATGATG CCTACACCGT TGTCAAAAAT
ATCTGGTCCA CACTGGATAA TCGCAAAGTA AATTATCAAC AACAACTTGC TGTAGTCGGA
GACTCTGGTG GCGGGGCTTT AGTGGCTAGT GTCAGTGCAA AAGCCCAGTT CGATAACCAA
GTAAAAATCG ATAAACAGGT CATGATCTAT CCCAGTCTGG ATTACACCAT GCAGAGCAGA
TCTATTGAAC AAAATGCAGA GGGTTACCTA CTGCAAAAAG GGAAAATTGG CTGGTACTTC
GACAACTACT TTAATGCCGG AGATGATCGT AGAAAAGCGT CACCGCTGCA AGGTGAGTTT
ACCGATGGTT TACCCGCAAC ATTGGTCTTT ACCGCCGAAT TCTGTCCCCT GCGTGACGAA
GGTACAAGCT ATATTGAAAA GCTCAATAAA ACTGGCGTTA CGACTAAGCT CATCCACTTC
CCCGATATGA TCCACACATT TATGAACATG GAAGATCTTG TCAAAAGTGA ATGTGAATCA
GTTTATCGTT CAATCACCGA GTTTTTAAAA TAG
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| Protein sequence | MRKVSDKLQP WLENFNQQIA ILIENGFKPT ATNAREGLAN LTKGLVTDIP EIAWVGDDLV
INDEYDVPVR IYHPAPEKAL PVIVYLHGGG HMAGSVTVYD PICRKLANAT QHIVVSVDYR
LAPECRFPAG LNDAYTVVKN IWSTLDNRKV NYQQQLAVVG DSGGGALVAS VSAKAQFDNQ
VKIDKQVMIY PSLDYTMQSR SIEQNAEGYL LQKGKIGWYF DNYFNAGDDR RKASPLQGEF
TDGLPATLVF TAEFCPLRDE GTSYIEKLNK TGVTTKLIHF PDMIHTFMNM EDLVKSECES
VYRSITEFLK
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