| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3535 |
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| Symbol | |
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| ID | 5612065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4307338 |
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| End bp | 4308249 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934488 |
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| Product | putative transcription regulator |
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| Protein accession | YP_001475267 |
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| Protein GI | 157376667 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA AAATCGTTTA CTTTCTACAC GTGGTTCGAA CAGGTTCTTT TAGCGATGCT
GCCAAGCAGT ATGGAATTTC AGCCTCGGCG GGTAGCCGCT GGATTATTGA ACTGGAAGAG
AATATGGGGG TTAGCTTACT CAAGCGTTCG ACCCGTAAAG TAGTACCTAC ACAGGCGGGA
GAACGGTTAT TCGATCGATT CTGCCATGTA AACACCGAAA TTGATGACAT CCTCACCGAA
ATACAAAACC TGGGTAATGA AGACCGCGGG GTGATCCGTA TAGCGAGCAC GCCACTTTTT
GCCAAAAATT TCCTCAGCCG GATCGTAGGC GAGTATCTAC GCGAGTATCC CTATGTCTCC
TTTCGAATCG TTGAAACCGC TTATGATGTT GACCATATCG ATGAGGTCGA CTTCTCTATC
AGGGCTAATG CTACTTACCA AGGTTACCTG GAAAAAGACA GCCTGCTGGT TAAACGCTCT
CTACTTCAAT ACCCCCTAAA AGCGTGTTGC TCACCCAGCT ATATTGAACA GTTTTCCTGT
CCTGAATTCC CGGAGGATCT CAAGAAGCAT AACTGCTTAT ATGCCTCAAC TTTAGTCGGT
GGCAATAAGT GGGTATTTGA ACTAGACGGA GAATTTACTA CCGTTGATAT TGCTCAAACT
GTTGAAGTGG AAGACAGCGA ATTTTTGAAG ACTGTGGCCC TAACAGGAGC TGGCATAGCT
TACTTGCCAA ATCAACTGAT TAAAGATGAA CTTGCTGATG GCCGCTTGGT GCCGGTACTC
GATAACTATA GTAATAGCCA ATTTGAATTC AGCCTCTATT TCAGGCCAAG AAAACAGATG
CCGACCCGAT GCGTCAACTT TAAGGAGTTC CTACTCAAAC GCGTACAAGA GATCAGTCAG
GAAACAACAT AA
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| Protein sequence | MLDKIVYFLH VVRTGSFSDA AKQYGISASA GSRWIIELEE NMGVSLLKRS TRKVVPTQAG
ERLFDRFCHV NTEIDDILTE IQNLGNEDRG VIRIASTPLF AKNFLSRIVG EYLREYPYVS
FRIVETAYDV DHIDEVDFSI RANATYQGYL EKDSLLVKRS LLQYPLKACC SPSYIEQFSC
PEFPEDLKKH NCLYASTLVG GNKWVFELDG EFTTVDIAQT VEVEDSEFLK TVALTGAGIA
YLPNQLIKDE LADGRLVPVL DNYSNSQFEF SLYFRPRKQM PTRCVNFKEF LLKRVQEISQ
ETT
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