| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3515 |
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| Symbol | |
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| ID | 5612238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4281510 |
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| End bp | 4282787 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934468 |
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| Product | putative manganese transporter |
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| Protein accession | YP_001475247 |
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| Protein GI | 157376647 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC TAGCCGACAA CCCAGTTATA CACTCAAAAA AGCACCCGGT TATGTCATTT
AAAGTGGCCT TGAAAGCATT GGGACCAGGC CTGTTAATGG CCGCCGCAGC CATTGGCGCT
TCACACTTGG TCGCTTCTAC GAGAGCCGGA GCAGAGTTTG GCTGGCAACT TGCGTGGTTA
ATTCTTGCAG TAAACCTTCT CAAATATCCT TTCTTTGCCG CTGGTGCTCG CTATACTGCA
GCCACCAATG AGAGTCTACT TCATGGTTAC TTAAAGCAAG GCAGAGGCTA TCTGCTTCTG
TTTACCGGAC TCAACACCCT AGCTGCAATT GCCAGCACGG CAGGGGTAAC GATGTTAACG
GCAGCCATGT TGACTCTTTT TATTCCGCTA TCTATCGATA TATTGGCGTT CATCGTCTTA
ATCTCCAGCT TAGTATTGCT CATTTTCGGC CACTACGCGC TACTCGATAA GCTCACTAAA
GTGATCATGT TTTTTCTGAC TATCACCACC TTAATTGCTG TCGCTTTAGC ACTGAATGCG
CCCTCAATGG TGAGTCCAGA ATTTATATCT CCCTCCCCTT GGCAATGGGG GTATATCGGC
TTTTTAGTTG CCATGATGGG TTGGATGCCC GCGCCGATAG AGGTCAGTTC ATGGAACTCT
TTGTGGTTAT TGGAAAAACA GAAAAGCCAA AGTGTCACCA AAGAGCAGGC CATCTTCGAC
TTTAACTTTG GCTACCTTAT TACAGCCCTG CTTGCCATCG TATTTTTAGC TTTGGGCTCT
TTAGTCATGC ATGGCAGCGG TGAGCATTTC TCATCATCGG GGGTTAAATT TGCGAACCAA
CTTATCACCT TATATAGTCA GGTTTTGGGC AATGAAACCC GTTACCTGAT AGGAGCCGTA
GCGCTTTTAT GTATATTCAG CACCACAGTG ACCGTTATCG ATGGCTATAG CCGAACCCTG
AATATGGGTT GGCAGCTGCT GACTAATAAA AACGAGTCGC AGAAACGACT GACAGGGGTC
ATGCTGACCA TCAGTGCGCT AGGACTGGCC ATAGTACTTT TCTTCAGAGG GGCGTTATTG
CCGCTGCTGG AATTTGTCAT GATATTGGCT TTCATGACCA CAGTGGTATT TGCCTGGTTA
AACTATAAAT TGATGACCAG TTCAGCCTTG CCAGAATCTG ACCGTTATGG CTTGAAAATG
AAGTCTCTTT CTATATTCGG CTTGCTTTAT TTAGTTGGCT TCGCCGGATT GTTTATTTAT
TGGATGGCAA CAAAGTAA
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| Protein sequence | MEKLADNPVI HSKKHPVMSF KVALKALGPG LLMAAAAIGA SHLVASTRAG AEFGWQLAWL
ILAVNLLKYP FFAAGARYTA ATNESLLHGY LKQGRGYLLL FTGLNTLAAI ASTAGVTMLT
AAMLTLFIPL SIDILAFIVL ISSLVLLIFG HYALLDKLTK VIMFFLTITT LIAVALALNA
PSMVSPEFIS PSPWQWGYIG FLVAMMGWMP APIEVSSWNS LWLLEKQKSQ SVTKEQAIFD
FNFGYLITAL LAIVFLALGS LVMHGSGEHF SSSGVKFANQ LITLYSQVLG NETRYLIGAV
ALLCIFSTTV TVIDGYSRTL NMGWQLLTNK NESQKRLTGV MLTISALGLA IVLFFRGALL
PLLEFVMILA FMTTVVFAWL NYKLMTSSAL PESDRYGLKM KSLSIFGLLY LVGFAGLFIY
WMATK
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