| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3506 |
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| Symbol | |
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| ID | 5612605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4272880 |
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| End bp | 4273824 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934459 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475238 |
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| Protein GI | 157376638 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3595] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.243271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA GTCAATTATT AAATTACCTC ACCATCCCCC TCATATTAGT AGCAAATATG
GCTATCGCAG CACAATCTGT CGATAAGCAA TTACAGGTAG ATGACAACCT AAAACTCAAT
ATCAAGGTAC TGAGAGGCGA CGTGAAGGTG AGGTCCTGGG ATAAGGATGA GATCAGCGTG
AAGGGGACAT TAGATGAACT CAGCGAAGGC TTTATATTAG ATAAGCAGGG AAACCAGGTC
ACTCTCGAAG ATAAAATGCC CCGTCACTTC AATGGTAATA ATAAGAGTGG TTCTGATTTA
ACTATCATGG TACCTAAAAA CTTAACCCTG GACGCAGAGG GCCTATCCTC AAGCTATAAC
CTTTCCTCTC TTTCAGGAAT TATTGGGATC TACTCCGTCA GTGGCAATAT CAATGCGTCC
GATATCGACA ATCAGATCTT CATCCACACC GTATCCGGGA ACATAAAAAC GTCTAAACTA
ACCGGAAAGA TTAAACTCGA CACCATATCG GGGTCGATAA AAGATAAAAA CAGTGATGGT
GAGATAAGCT ATAAGCTGGT CAGTGGAGAT CTTACAGCAA ATAGCTCAGC TGAAAATGTC
TCTATCGAGC AGATATCGGG AGATGCCAAC GTTCAGCTGA AAAAAGTGAA TGAATTAAAA
GTAAAAACGA TCAGTGGCGA TATCACGCTC GCGGTGAGCA GTCTTAAATC AAGGGCGAAC
TTAGATAGCG TGAGTGGTGG TATTGAGCTA AAGCTCCCTA AAAATCTTGC CGCCAACTTC
AATATCAATG GCGGCCCCGG AGGTAAGATC AGAAACAGTC TGACCGACGA CGAGCCAAAG
AAAGAGAAGT ACTCTCCGAC CTCTTACCTT AAATTCCAAA CGGGTAGTAC CGGCGCAGAT
ATCAAAATTT CAACCATTAG TGGCTCAATC AAGCTCTCAG ATTAG
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| Protein sequence | MKVSQLLNYL TIPLILVANM AIAAQSVDKQ LQVDDNLKLN IKVLRGDVKV RSWDKDEISV
KGTLDELSEG FILDKQGNQV TLEDKMPRHF NGNNKSGSDL TIMVPKNLTL DAEGLSSSYN
LSSLSGIIGI YSVSGNINAS DIDNQIFIHT VSGNIKTSKL TGKIKLDTIS GSIKDKNSDG
EISYKLVSGD LTANSSAENV SIEQISGDAN VQLKKVNELK VKTISGDITL AVSSLKSRAN
LDSVSGGIEL KLPKNLAANF NINGGPGGKI RNSLTDDEPK KEKYSPTSYL KFQTGSTGAD
IKISTISGSI KLSD
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