| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3410 |
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| Symbol | |
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| ID | 5610754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4157570 |
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| End bp | 4158493 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934350 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475142 |
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| Protein GI | 157376542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.708924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00480919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAT CCAATCAGGC CTACCTCTAC GGCATCGGCG CTATCTGCCT TTGGTCTACT
GTCGCCACCG CCTTTAAATT GGCGTTAGCA CACTTAACTC CACTGCAGTT GGTGTTCGTC
GCCGTCATAA CCTCAATATT TGCCTTAGGT ATTATTCTTA CGGTCCAGCG TAAACTCAGC
CTGATAAAGA GTCAGTTTTC TCAACGCCCT CTGTTTTACC TGCAGACGGG ATTACTGAAT
CCATTCCTTT ACTATCTGGT GCTGTTTAAA GCTTACGACC TGTTACCAGC TCAACAGGCA
CTCTCGCTCA ATTACACCTG GGCCATCTTA CTGCCGCTGC TCTCGGTTCC CCTGTTAGCT
CAGAAGCTGA GAAAAAGTGA TATGACGGCA GCAATAGTCG CGTATTTTGG GGTATTTATC
ATCGCTACAA ATGGCAATCT GACAGGGTTT TCATTTGAGA GTGGCACCGG AGTCATGCTG
GCTCTGACCA GCACATTACT CTGGTCGCTC TATTGGATCA TCAATACTAA AGACAAGGGC
GATCCTGTCG TTAGCCTGCT ACTGAGCTTC CTGGTCGGCT TCCCGTTTAT CTTAGGCACC
CTGTTATTCA CGCAAGAGCT GCCAAGTTGG AACGCTCAGG CCTTCGCTGC CGGCATCTAT
GTGGGTCTGT TCGAGATGGG CGTCACCTTC GTGCTTTGGT TAGTGGCTCT GAAAAAGGCC
GACCGCACCG CCAGCATCAG CACTATGGTG TTTATGTCTC CGGTCATGTC TATCGGCTTT
ATCGCCTGGA TATTGCAGGA GGAGATAGCG AAATCTACCT ATGTAGGACT GTTCCTGATC
CTGATTGCAC TTGCCCTACA GCAGTTATTA CCTCATCTGA ATAAGCTGCG TTCAAAAATT
CACACCTCCG GCGAATCAAT ATAG
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| Protein sequence | MKQSNQAYLY GIGAICLWST VATAFKLALA HLTPLQLVFV AVITSIFALG IILTVQRKLS
LIKSQFSQRP LFYLQTGLLN PFLYYLVLFK AYDLLPAQQA LSLNYTWAIL LPLLSVPLLA
QKLRKSDMTA AIVAYFGVFI IATNGNLTGF SFESGTGVML ALTSTLLWSL YWIINTKDKG
DPVVSLLLSF LVGFPFILGT LLFTQELPSW NAQAFAAGIY VGLFEMGVTF VLWLVALKKA
DRTASISTMV FMSPVMSIGF IAWILQEEIA KSTYVGLFLI LIALALQQLL PHLNKLRSKI
HTSGESI
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